Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL158032.1-201ENST00000605401 106 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC009229.3-201ENST00000608056 282 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 MIR6864-201ENST00000617935 70 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL589994.2-201ENST00000621124 579 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 PLCE1P1-201ENST00000622094 305 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RNA5SP196-201ENST00000625967 102 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC092079.1-201ENST00000558620 1985 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 XIAPP3-201ENST00000312918 795 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.463-201ENST00000384271 102 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RNY1P14-201ENST00000384426 108 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 MT-TG-201ENST00000387429 68 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC011998.1-201ENST00000433403 117 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RPS3AP12-201ENST00000443616 753 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RPS15AP27-201ENST00000449183 343 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC002553.2-201ENST00000453217 340 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL583843.1-201ENST00000456070 346 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL445433.1-201ENST00000457507 257 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.708-201ENST00000516950 96 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-1092P-201ENST00000516955 87 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 HMGN1P28-201ENST00000521340 364 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AC012443.1-201ENST00000605605 231 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 U2.17-201ENST00000611454 95 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 AL138726.1-201ENST00000614873 333 ntBASIC5.2□□□□□ -1.58
SYNGAP1Q96PV0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 MFSD8-242ENST00000641690 4199 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.389-201ENST00000383924 113 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.574-201ENST00000384766 95 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 RNU11-4P-201ENST00000391149 133 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AL360182.1-201ENST00000397433 468 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 PTMAP2-201ENST00000397627 327 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-847P-201ENST00000411115 108 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 BX682237.1-201ENST00000415016 335 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 TMSB10P2-201ENST00000416049 131 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 RPL23AP50-201ENST00000434149 455 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 RPL36AP6-201ENST00000435770 321 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC004938.1-201ENST00000438468 308 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 PHBP16-201ENST00000446318 950 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 GSTA11P-201ENST00000452866 669 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 RN7SL283P-201ENST00000489055 303 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC135721.1-201ENST00000497954 479 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC110794.1-201ENST00000505816 425 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC124068.1-201ENST00000563131 678 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 HMGB1P24-202ENST00000615653 685 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC103705.1-201ENST00000619013 241 ntBASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.19□□□□□ -1.58
SYNGAP1Q96PV0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AL445487.1-201ENST00000415694 1580 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC126323.6-202ENST00000568092 3511 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-593P-201ENST00000364716 112 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.455-201ENST00000384230 98 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 NDUFS5P1-201ENST00000405668 289 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-1050P-201ENST00000410388 107 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU4-6P-201ENST00000410804 122 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC011933.1-201ENST00000413334 321 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 UBE2FP1-201ENST00000416536 447 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms