Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 CR383656.7-201ENST00000548164 174 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 TXNP4-201ENST00000575018 310 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 MIR3613-201ENST00000579844 87 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC174048.1-201ENST00000603389 144 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC022164.1-201ENST00000568767 2673 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CNTNAP3BQ96NU0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.34□□□□□ -1.56
CNTNAP3BQ96NU0 AP001284.1-201ENST00000528393 2118 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC019155.1-201ENST00000382242 574 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 BX276092.4-201ENST00000452056 248 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC074255.1-201ENST00000511259 501 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 TRAV32-201ENST00000553993 340 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC009127.3-201ENST00000570531 403 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC012616.1-201ENST00000600294 197 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC240442.1-201ENST00000616055 283 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC000374.1-201ENST00000434698 1745 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC068870.1-201ENST00000563737 2455 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC110774.1-201ENST00000623567 2018 ntBASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.33□□□□□ -1.56
CNTNAP3BQ96NU0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RNA5SP478-201ENST00000364657 115 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RNU6-818P-201ENST00000364837 108 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 Y_RNA.308-201ENST00000365043 101 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RNY4P18-201ENST00000391107 89 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AL513475.1-201ENST00000406602 315 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 MIR1250-201ENST00000408098 113 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AL162389.1-201ENST00000449233 177 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AL137159.1-201ENST00000452808 512 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RPL23AP65-201ENST00000475608 468 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 Y_RNA.686-201ENST00000516548 134 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RNU6-971P-201ENST00000516920 106 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC136777.2-201ENST00000522979 358 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC006077.1-201ENST00000604746 343 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 TUG1_2.1-201ENST00000614234 87 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC007998.5-201ENST00000622938 237 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC110801.1-201ENST00000623590 212 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 AC010332.2-201ENST00000613083 1904 ntBASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms