Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 HMGB1P49-201ENST00000418882 569 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC105272.1-201ENST00000438604 198 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 MTND2P24-201ENST00000453434 806 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AL109741.2-201ENST00000455561 343 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC034222.1-201ENST00000494052 532 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 MTND2P32-201ENST00000521584 1038 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 UBTFL10-201ENST00000528532 562 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AMZ2P1-203ENST00000565833 850 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 NUTF2P8-201ENST00000604593 363 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AL450336.1-201ENST00000605180 586 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC079597.1-201ENST00000624306 508 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC019226.1-201ENST00000625666 515 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC084035.1-201ENST00000634543 607 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 OR4G2P-202ENST00000641004 1759 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AL672167.1-206ENST00000356293 943 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 RNU6-223P-201ENST00000362830 107 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 SNORA18.3-201ENST00000384122 132 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AL590084.2-201ENST00000401481 382 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AL122016.1-201ENST00000403365 367 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 MTCO1P17-201ENST00000411522 491 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 MTCO2P21-201ENST00000419780 677 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 SAR1AP4-201ENST00000429225 591 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 RPL35AP22-201ENST00000436855 335 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 ATG12P2-201ENST00000456830 416 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 RNU6-56P-201ENST00000516986 93 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 DUXAP1-201ENST00000556632 463 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AC006504.3-201ENST00000586818 523 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 ELOCP29-201ENST00000588193 334 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 Z99129.2-201ENST00000619967 314 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 PCMTD1P7-201ENST00000634506 357 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.04□□□□□ -1.92
ZNF560Q96MR9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZNF560Q96MR9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 FAM133CP-201ENST00000332869 704 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 SNORA23-201ENST00000365128 182 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 MIR513B-201ENST00000385136 84 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 YWHAZP7-201ENST00000436906 631 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AP000542.1-201ENST00000448473 371 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 RPS20P20-201ENST00000460498 340 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 TTC39CP1-201ENST00000512513 755 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 RNU5A-4P-201ENST00000516588 111 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 HPRT1P3-201ENST00000539521 576 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 HMGB1P6-201ENST00000569046 646 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AC136618.2-201ENST00000575091 400 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AF131215.7-201ENST00000602443 707 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AL138713.1-201ENST00000624026 2130 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 OR5H6-203ENST00000642105 978 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AL049641.1-201ENST00000441055 1948 ntBASIC3.03□□□□□ -1.92
ZNF560Q96MR9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF560Q96MR9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC007785.2-201ENST00000598627 1916 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms