Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.84□□□□□ -1.63
DDX11Q96FC9 AC113194.1-201ENST00000606037 500 ntBASIC4.84□□□□□ -1.63
DDX11Q96FC9 AC103710.3-201ENST00000608157 948 ntBASIC4.84□□□□□ -1.63
DDX11Q96FC9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DDX11Q96FC9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DDX11Q96FC9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DDX11Q96FC9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.84□□□□□ -1.64
DDX11Q96FC9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 MARK2P15-201ENST00000432204 2186 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 Y_RNA.259-201ENST00000364619 101 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 MIR554-201ENST00000384874 96 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 MIR514A2-201ENST00000385131 88 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 MIR514A3-201ENST00000385132 88 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 RNU11-4P-201ENST00000391149 133 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 RNA5SP39-201ENST00000411245 120 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC018630.2-202ENST00000422992 927 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 FTH1P1-201ENST00000437933 532 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 MTND3P16-201ENST00000452205 344 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC007547.1-201ENST00000462177 490 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC006512.1-201ENST00000468816 291 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC146944.2-203ENST00000502493 354 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC139495.1-202ENST00000513164 354 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 RNU6-1170P-201ENST00000515974 106 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 SNORD27.1-201ENST00000516319 72 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 RN7SKP256-201ENST00000517201 314 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AP003497.1-201ENST00000528472 562 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC024224.1-201ENST00000538284 609 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC026464.5-201ENST00000562497 722 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 RPL23AP87-202ENST00000573039 466 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC053481.4-201ENST00000583164 216 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 GLUD1P4-201ENST00000590914 418 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC245389.1-201ENST00000605141 529 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AL121992.2-201ENST00000606262 256 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 RNU6-89P-201ENST00000606519 100 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC009318.4-201ENST00000620496 486 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 MIR7702-201ENST00000621931 59 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
DDX11Q96FC9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX11Q96FC9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX11Q96FC9 AC097714.1-201ENST00000511272 1647 ntBASIC4.83□□□□□ -1.64
DDX11Q96FC9 AL136964.1-201ENST00000622038 2990 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 RNA5SP502-201ENST00000362694 119 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 Y_RNA.144-201ENST00000363521 113 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 Y_RNA.231-201ENST00000364358 102 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 RNU6-831P-201ENST00000384548 107 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 RNU6-193P-201ENST00000410977 107 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC137499.1-201ENST00000427602 88 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 PSMA6P3-201ENST00000428242 164 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 PSMA2P3-201ENST00000429685 675 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AL356276.2-201ENST00000435919 558 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC006480.1-201ENST00000449887 378 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 HMGB1P15-201ENST00000453854 435 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC104308.1-201ENST00000454621 333 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 RN7SL604P-201ENST00000492589 296 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC093767.1-201ENST00000504523 156 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC114797.1-201ENST00000514003 728 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC060771.1-201ENST00000582031 164 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC105224.1-201ENST00000587055 421 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC025946.2-201ENST00000603398 234 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AC040896.1-201ENST00000613819 479 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 AL159972.1-201ENST00000625150 448 ntBASIC4.82□□□□□ -1.64
DDX11Q96FC9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX11Q96FC9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX11Q96FC9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX11Q96FC9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX11Q96FC9 RNU5E-8P-201ENST00000363502 116 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 Y_RNA.145-201ENST00000363527 102 ntBASIC4.81□□□□□ -1.64
DDX11Q96FC9 SNORA62.3-201ENST00000365110 153 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms