Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 ANKRD30BP1-201ENST00000451052 2186 ntBASIC6.1□□□□□ -1.43
PTCD2Q8WV60 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCD2Q8WV60 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNU6-78P-201ENST00000362897 107 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNA5SP375-201ENST00000362975 119 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNU6-527P-201ENST00000363425 104 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RN7SKP128-201ENST00000364270 303 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RN7SKP15-201ENST00000364742 309 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNU6-159P-201ENST00000391080 106 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNU6-381P-201ENST00000391259 108 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 Y_RNA.595-201ENST00000410403 105 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNA5SP44-201ENST00000410446 133 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AC245096.1-201ENST00000413104 546 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RPL35AP31-201ENST00000418340 337 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 NDUFB4P7-201ENST00000423198 363 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RPL12P16-201ENST00000431098 498 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RNU7-107P-201ENST00000459121 61 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 snoU109.2-201ENST00000459316 135 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AC068228.1-201ENST00000461723 211 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AC090049.2-201ENST00000550377 109 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 HMGN2P47-201ENST00000559378 272 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AL590392.1-201ENST00000604960 446 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AL138963.2-201ENST00000605137 226 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 FAM27E2-201ENST00000619668 403 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AC092628.2-201ENST00000622492 339 ntBASIC6.09□□□□□ -1.43
PTCD2Q8WV60 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.09□□□□□ -1.43
PTCD2Q8WV60 AC022164.1-201ENST00000568767 2673 ntBASIC6.09□□□□□ -1.44
PTCD2Q8WV60 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PTCD2Q8WV60 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
PTCD2Q8WV60 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PTCD2Q8WV60 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.09□□□□□ -1.44
PTCD2Q8WV60 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.09□□□□□ -1.44
PTCD2Q8WV60 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC025470.1-201ENST00000510053 2032 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 SRP72P2-201ENST00000344851 1979 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RNU1-134P-201ENST00000362935 165 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RNU6-137P-201ENST00000363680 108 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AL096829.1-201ENST00000413677 457 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC016027.4-201ENST00000450866 277 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RPL10P17-201ENST00000453852 316 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC009963.3-201ENST00000458090 486 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AL049874.1-201ENST00000489560 388 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 Y_RNA.694-201ENST00000516677 117 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RNU2-56P-201ENST00000516826 190 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 RNU6-1198P-201ENST00000516904 67 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 SNORA31.19-201ENST00000517079 126 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC100767.1-201ENST00000528178 123 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC008507.3-201ENST00000585753 472 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC006115.2-201ENST00000596823 202 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 AC241585.2-209ENST00000638217 143 ntBASIC6.08□□□□□ -1.44
PTCD2Q8WV60 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD2Q8WV60 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD2Q8WV60 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms