Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 MTND4P20-201ENST00000424125 869 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC079780.1-201ENST00000428259 207 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AL035407.1-201ENST00000429211 571 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 RPS27AP8-201ENST00000452665 445 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 HMGB1P15-201ENST00000453854 435 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AL445669.2-201ENST00000454425 421 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC010486.3-201ENST00000511602 785 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 ROCK1P1-201ENST00000573767 549 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 WISP1-OT1-201ENST00000602893 642 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 OR2AS2P-201ENST00000606902 342 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC097468.3-201ENST00000607956 456 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC122133.1-201ENST00000613964 233 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 AC011477.1-204ENST00000623416 1325 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LINC01555Q8NAE3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC01555Q8NAE3 AL353746.1-201ENST00000566293 6881 ntBASIC2.56□□□□□ -2
LINC01555Q8NAE3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 RNU6-50P-201ENST00000362356 103 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 MIR634-201ENST00000385208 97 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 MIR1302-8-201ENST00000408342 128 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 TPMTP3-201ENST00000411928 735 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 MTND5P7-201ENST00000413558 1798 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 HMGB1P11-201ENST00000413899 637 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 MRPL50P2-201ENST00000416821 482 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL445669.1-201ENST00000426743 755 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 ARL5AP4-201ENST00000430731 512 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 MTCO1P27-201ENST00000448269 226 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 EPS15P1-201ENST00000448836 336 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 USP9YP10-201ENST00000454868 628 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 HMGB1P25-201ENST00000468402 607 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC005178.1-201ENST00000508392 440 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC006445.2-201ENST00000510061 472 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 SNORA31.20-201ENST00000517111 133 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 IGHV3-76-201ENST00000522465 295 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC012321.1-201ENST00000561622 1588 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC002400.1-201ENST00000569310 726 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL355812.1-201ENST00000603215 216 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 RPL23AP92-201ENST00000603609 255 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 MIR3974-201ENST00000637126 96 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
LINC01555Q8NAE3 AC004925.1-201ENST00000624256 2706 ntBASIC2.55□□□□□ -2
LINC01555Q8NAE3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01555Q8NAE3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.54□□□□□ -2
LINC01555Q8NAE3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.54□□□□□ -2
LINC01555Q8NAE3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.54□□□□□ -2
LINC01555Q8NAE3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01555Q8NAE3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01555Q8NAE3 AC021755.1-201ENST00000559747 1447 ntBASIC2.54□□□□□ -2
LINC01555Q8NAE3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01555Q8NAE3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01555Q8NAE3 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.54□□□□□ -2
LINC01555Q8NAE3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01555Q8NAE3 DEFB109C-201ENST00000382575 264 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms