Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 FAM103A2P-201ENST00000444122 354 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL592447.1-201ENST00000447592 540 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 RNU7-125P-201ENST00000458760 62 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC109464.2-201ENST00000510242 943 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AP001804.3-201ENST00000525146 880 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 DEFB108D-201ENST00000527787 222 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC107016.2-201ENST00000547968 190 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC007954.1-201ENST00000554198 494 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AP001004.1-201ENST00000582468 324 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC090616.2-202ENST00000584248 222 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 UBE2L4-201ENST00000587688 464 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC078899.3-201ENST00000599065 212 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL357094.1-201ENST00000603845 844 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL160281.1-201ENST00000605307 311 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL360219.1-201ENST00000610230 366 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC009268.2-201ENST00000621925 457 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AL158801.5-201ENST00000623123 465 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC002546.1-201ENST00000588041 2504 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
C9orf40Q8IXQ3 AC009902.3-201ENST00000606235 2172 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-500P-201ENST00000362349 107 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-76P-201ENST00000384060 104 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-851P-201ENST00000384565 107 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AL359704.1-201ENST00000411586 781 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC092447.3-201ENST00000426027 686 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AL133217.1-201ENST00000450980 425 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 ART2BP-201ENST00000453501 499 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 RPL21P41-201ENST00000459863 264 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC006483.1-201ENST00000487308 313 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 SNORA70.16-201ENST00000516390 95 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 SNORA31.22-201ENST00000517204 135 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AP005205.1-201ENST00000563503 508 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC012435.1-202ENST00000568772 240 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC060771.1-201ENST00000582031 164 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC105224.1-201ENST00000587055 421 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC112187.2-201ENST00000604345 283 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 BCRP9-201ENST00000605312 388 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC004067.1-201ENST00000608733 700 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC131902.3-201ENST00000611767 581 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC004223.4-201ENST00000612426 332 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AP003485.2-201ENST00000623636 610 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC092192.1-201ENST00000633154 1018 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 AC011460.1-201ENST00000636268 1834 ntBASIC2.68□□□□□ -1.98
C9orf40Q8IXQ3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC006378.2-201ENST00000623178 2476 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RNA5SP295-201ENST00000362655 121 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-516P-201ENST00000411381 104 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 TPMTP3-201ENST00000411928 735 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 MTND1P21-201ENST00000412991 285 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC107081.1-201ENST00000414975 361 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms