Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TBCAP3-201ENST00000512475 312 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RNA5SP454-201ENST00000517231 127 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL590392.1-201ENST00000604960 446 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 TLK1P1-201ENST00000456760 2440 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL022311.1-201ENST00000623726 19416 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC140134.1-201ENST00000511830 3544 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 Y_RNA.148-201ENST00000363557 117 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AL360182.1-201ENST00000397433 468 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 RN7SKP267-201ENST00000410381 285 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 NDUFB4P7-201ENST00000423198 363 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 RPEP3-201ENST00000425462 676 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AL160004.2-201ENST00000432935 350 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 HSPD1P21-201ENST00000436541 245 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 CYCSP24-201ENST00000445119 316 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 BTF3P15-201ENST00000455606 336 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AL160314.1-201ENST00000490836 438 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 RNU6-1256P-201ENST00000516539 103 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC087854.1-201ENST00000519706 414 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AP004242.1-201ENST00000533701 349 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 RN7SL652P-201ENST00000577769 300 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 DUSP12P1-201ENST00000612874 516 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 MIR6830-201ENST00000636015 70 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 OR52H1-202ENST00000641796 1061 ntBASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NPAS4Q8IUM7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 Y_RNA.534-201ENST00000384599 112 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 MIR548F4-201ENST00000408515 105 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RN7SKP158-201ENST00000410453 326 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RNU4-25P-201ENST00000410569 230 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC063979.1-201ENST00000415539 377 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC114482.1-201ENST00000418010 247 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RPL31P12-201ENST00000422587 358 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RPL21P104-201ENST00000464143 478 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RPL31P13-201ENST00000484151 370 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 HMGB1P30-201ENST00000492455 606 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC083829.1-201ENST00000503756 657 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RNU6-1069P-201ENST00000516612 133 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 RNU6-323P-201ENST00000521915 107 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 MIR4680-201ENST00000580906 66 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC069061.3-201ENST00000582254 823 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC098826.3-201ENST00000603823 466 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 Z99571.1-201ENST00000636677 394 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC008013.2-202ENST00000637965 364 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AC005005.4-201ENST00000623789 16698 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
NPAS4Q8IUM7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.58
NPAS4Q8IUM7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms