Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNU6-1219P-201ENST00000516143 112 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC103996.1-201ENST00000555468 102 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC073349.3-201ENST00000617616 186 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AC008785.1-201ENST00000624475 456 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCRAQ6ISU1 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTCRAQ6ISU1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.59□□□□□ -1.52
PTCRAQ6ISU1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
PTCRAQ6ISU1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.59□□□□□ -1.52
PTCRAQ6ISU1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTCRAQ6ISU1 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.272-201ENST00000364696 102 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 SNORA70H-201ENST00000383910 135 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 SNORA70J-201ENST00000384182 135 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 Y_RNA.568-201ENST00000384742 113 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 RNU6-651P-201ENST00000411040 105 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AL358472.1-201ENST00000431295 329 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AK3P2-201ENST00000507976 429 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AP005660.1-201ENST00000522972 293 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AK6P2-201ENST00000549020 471 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 DNM1P47-203ENST00000571780 12667 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AC022164.1-201ENST00000568767 2673 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 AC144833.1-201ENST00000567953 4089 ntBASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCRAQ6ISU1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 SAGE2P-201ENST00000420011 2126 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 CYCSP10-201ENST00000417973 294 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AC015977.1-201ENST00000418887 292 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 RPL18P10-201ENST00000425606 538 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 MTCO1P39-201ENST00000426148 480 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AL162725.1-201ENST00000435405 301 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AC005002.2-201ENST00000438228 269 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 RPS29P27-201ENST00000463711 170 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 PPIAP21-201ENST00000464473 501 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 RPL30P1-201ENST00000488676 339 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 SNORA31.22-201ENST00000517204 135 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 MIR5096-201ENST00000583713 70 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 MIR4691-201ENST00000583764 85 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 AL139395.1-201ENST00000603662 160 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 BRDTP1-201ENST00000605735 677 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCRAQ6ISU1 PHKBP1-201ENST00000450951 1951 ntBASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTCRAQ6ISU1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms