Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 FAM60BP-201ENST00000578364 658 ntBASIC4.31□□□□□ -1.72
IRF9Q00978 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.31□□□□□ -1.72
IRF9Q00978 RN7SL690P-201ENST00000582087 240 ntBASIC4.31□□□□□ -1.72
IRF9Q00978 SNRPGP15-201ENST00000600149 222 ntBASIC4.31□□□□□ -1.72
IRF9Q00978 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.31□□□□□ -1.72
IRF9Q00978 AC104662.1-201ENST00000604448 511 ntBASIC4.31□□□□□ -1.72
IRF9Q00978 AL445363.3-201ENST00000623080 671 ntBASIC4.31□□□□□ -1.72
IRF9Q00978 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
IRF9Q00978 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
IRF9Q00978 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
IRF9Q00978 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
IRF9Q00978 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IRF9Q00978 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
IRF9Q00978 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
IRF9Q00978 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
IRF9Q00978 SDAD1P2-201ENST00000441308 2028 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 RNA5SP443-201ENST00000363083 132 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 RNU6-288P-201ENST00000363690 104 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 SNORD113.2-201ENST00000364166 89 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 Y_RNA.399-201ENST00000383955 105 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 SNORA70F-201ENST00000384142 135 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 RNU6-393P-201ENST00000384475 107 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 SNORA16.2-201ENST00000390991 127 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.3□□□□□ -1.72
IRF9Q00978 RPL7P10-201ENST00000417407 739 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 HMGB1P27-201ENST00000431429 603 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AL591212.2-201ENST00000433923 257 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.3□□□□□ -1.72
IRF9Q00978 DHFRP3-201ENST00000455595 559 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 Y_RNA.635-201ENST00000459041 101 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 RPL21P126-201ENST00000470049 478 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.3□□□□□ -1.72
IRF9Q00978 HSPE1P6-201ENST00000479457 291 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC108860.1-201ENST00000484521 383 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IRF9Q00978 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC135001.1-201ENST00000544546 283 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC090115.3-201ENST00000553218 849 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.3□□□□□ -1.72
IRF9Q00978 MIR4270-201ENST00000581799 70 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 AC022893.3-201ENST00000607665 437 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
IRF9Q00978 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
IRF9Q00978 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
IRF9Q00978 AC012618.3-205ENST00000637896 1496 ntBASIC4.3□□□□□ -1.72
IRF9Q00978 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
IRF9Q00978 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
IRF9Q00978 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.29□□□□□ -1.72
IRF9Q00978 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
IRF9Q00978 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.29□□□□□ -1.72
IRF9Q00978 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC000123.3-201ENST00000624029 4975 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RNU5A-1-201ENST00000362698 116 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RNU6-715P-201ENST00000365204 103 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 Y_RNA.339-201ENST00000365325 102 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RNU6-434P-201ENST00000384376 107 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 AL139039.1-201ENST00000401900 692 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC080125.1-201ENST00000414888 684 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.29□□□□□ -1.72
IRF9Q00978 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC005019.1-201ENST00000436455 431 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 GTF2IP13-201ENST00000438487 386 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC011753.3-201ENST00000443436 406 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC010285.1-201ENST00000470580 392 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RPS29P22-201ENST00000472363 168 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
IRF9Q00978 RPL7P43-201ENST00000478876 753 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC068587.1-201ENST00000483613 781 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC006499.6-201ENST00000511169 607 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RNU6-559P-201ENST00000516151 98 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 RNU6-256P-201ENST00000516747 97 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 AP005597.4-201ENST00000526762 229 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 FRG2DP-202ENST00000566967 323 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.29□□□□□ -1.72
IRF9Q00978 AC078795.3-201ENST00000602913 472 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC005034.5-201ENST00000604219 466 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 ATP1B3P1-201ENST00000605365 821 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AC126177.8-201ENST00000618339 1015 ntBASIC4.29□□□□□ -1.72
IRF9Q00978 AL136964.1-201ENST00000622038 2990 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms