Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 Y_RNA.72-201ENST00000362894 103 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 Y_RNA.231-201ENST00000364358 102 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 RNU6-116P-201ENST00000384042 109 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 RNU6-550P-201ENST00000391057 101 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC080125.1-201ENST00000414888 684 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AL451062.2-201ENST00000427515 271 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 CBWD4P-201ENST00000445695 655 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC087588.1-201ENST00000462203 316 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX6-1P78426 RPS26P28-201ENST00000470806 348 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 RPL21P99-201ENST00000480369 423 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 MTCYBP18-201ENST00000501056 747 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC114786.4-201ENST00000508771 728 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC098799.2-201ENST00000509466 868 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC098591.2-201ENST00000510152 315 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 PARP4P3-201ENST00000510265 317 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 SNORA70.16-201ENST00000516390 95 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 MTND6P33-201ENST00000571794 183 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 RPL23AP87-202ENST00000573039 466 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 MIR4429-201ENST00000580105 73 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 MIR3690-201ENST00000580266 75 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC012417.1-201ENST00000582307 1039 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 AC011712.1-201ENST00000588959 234 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC245389.1-201ENST00000605141 529 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.92□□□□□ -1.78
NKX6-1P78426 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX6-1P78426 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NKX6-1P78426 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NKX6-1P78426 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 MTND4P12-201ENST00000498999 1377 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 MIR708-201ENST00000390708 88 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RNU6-332P-201ENST00000391193 108 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RPL32P23-201ENST00000397237 405 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RPS12P24-201ENST00000412619 387 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX6-1P78426 NDUFB4P7-201ENST00000423198 363 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 SRIP2-201ENST00000428470 166 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX6-1P78426 ERLEC1P1-201ENST00000433806 578 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX6-1P78426 RPL23AP93-201ENST00000440847 484 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 PHBP16-201ENST00000446318 950 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX6-1P78426 ELOCP23-201ENST00000452014 332 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RPL31P60-201ENST00000478450 367 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RPL39P36-201ENST00000490784 156 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AC046134.1-201ENST00000514454 666 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RNU6-1256P-201ENST00000516539 103 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 RANP9-201ENST00000519957 271 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AL137161.1-201ENST00000532231 390 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AL121576.1-201ENST00000556055 276 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AC018638.8-201ENST00000588755 281 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 BNIP3P9-201ENST00000603714 553 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AC022893.3-201ENST00000607665 437 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AC107294.1-201ENST00000609524 467 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 uc_338.34-201ENST00000617467 174 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL713922.2-201ENST00000619384 716 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 AL357559.1-201ENST00000622228 274 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX6-1P78426 AC100810.6-201ENST00000638068 285 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX6-1P78426 CPHL1P-201ENST00000461341 3407 ntBASIC3.91□□□□□ -1.78
NKX6-1P78426 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX6-1P78426 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX6-1P78426 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms