Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 BX276092.3-201ENST00000424182 230 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.8□□□□□ -1.96
CCNA1P78396 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.8□□□□□ -1.96
CCNA1P78396 FO393414.1-201ENST00000428697 1184 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 AL590233.1-201ENST00000430017 456 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 MTND2P24-201ENST00000453434 806 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 CACYBPP2-201ENST00000453625 678 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.8□□□□□ -1.96
CCNA1P78396 AC092436.1-201ENST00000506450 503 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 RNU6-1261P-201ENST00000517194 104 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCNA1P78396 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.8□□□□□ -1.96
CCNA1P78396 COX6CP5-201ENST00000527162 228 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.8□□□□□ -1.96
CCNA1P78396 HSPE1P3-201ENST00000559254 309 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 MIR3616-201ENST00000584070 92 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CCNA1P78396 AC004853.1-201ENST00000604902 698 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 AP005229.2-201ENST00000609980 697 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.8□□□□□ -1.96
CCNA1P78396 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCNA1P78396 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCNA1P78396 AC005539.1-201ENST00000443768 1479 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 Z99496.1-201ENST00000469424 1477 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCNA1P78396 RNU1-91P-201ENST00000364746 163 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 TAS2R15P-201ENST00000390674 928 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 RNA5SP210-201ENST00000391034 120 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC027644.1-201ENST00000419595 298 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CCNA1P78396 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCNA1P78396 FGF7P5-201ENST00000441829 291 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNA1P78396 RPL39P6-201ENST00000448289 150 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNA1P78396 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNA1P78396 CDC42P4-201ENST00000510507 563 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.79□□□□□ -1.96
CCNA1P78396 CKS1BP7-201ENST00000522230 235 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNA1P78396 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNA1P78396 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.79□□□□□ -1.96
CCNA1P78396 MIR4769-201ENST00000584126 77 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL355877.2-201ENST00000603670 358 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC013553.2-201ENST00000604244 589 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC103810.6-201ENST00000606708 136 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL158211.2-201ENST00000607282 395 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC078880.5-201ENST00000617845 421 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AL157770.1-201ENST00000623049 439 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNA1P78396 AC007785.2-201ENST00000598627 1916 ntBASIC2.79□□□□□ -1.96
CCNA1P78396 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCNA1P78396 MTCO1P9-201ENST00000505577 1534 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
CCNA1P78396 SNRPEP2-201ENST00000397592 279 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCNA1P78396 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
CCNA1P78396 AC007742.1-201ENST00000425789 329 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 ELOCP26-201ENST00000436067 329 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 AC092427.1-201ENST00000439177 601 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.78□□□□□ -1.96
CCNA1P78396 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.78□□□□□ -1.96
CCNA1P78396 MTCYBP3-201ENST00000445588 1137 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 BMI1P1-201ENST00000445879 941 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 COX6CP18-201ENST00000448769 222 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
CCNA1P78396 AC092155.2-201ENST00000454675 477 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 RPS15AP17-201ENST00000470598 390 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 RNA5SP281-201ENST00000516504 135 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 RNA5SP471-201ENST00000516971 106 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.78□□□□□ -1.96
CCNA1P78396 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.78□□□□□ -1.96
CCNA1P78396 AL136520.1-202ENST00000555494 763 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCNA1P78396 MIR4637-201ENST00000582405 84 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CCNA1P78396 OR1M4P-201ENST00000589199 287 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 RPL21P136-201ENST00000605378 396 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCNA1P78396 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 AL450472.3-201ENST00000615578 367 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 AL159972.1-201ENST00000625150 448 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
CCNA1P78396 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCNA1P78396 AL356473.1-201ENST00000406203 1408 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCNA1P78396 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.77□□□□□ -1.97
CCNA1P78396 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCNA1P78396 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCNA1P78396 SNORA68.1-201ENST00000364537 132 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCNA1P78396 RNU6-207P-201ENST00000384137 107 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 MIR514A1-201ENST00000385133 98 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 AL592310.1-201ENST00000414330 671 ntBASIC2.77□□□□□ -1.97
CCNA1P78396 AC099548.1-201ENST00000421443 426 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms