Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM6P62312 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM6P62312 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM6P62312 AC008127.2-201ENST00000549925 1075 ntBASIC1.93□□□□□ -2.1
LSM6P62312 AC124947.2-202ENST00000552735 133 ntBASIC1.93□□□□□ -2.1
LSM6P62312 AC080013.4-201ENST00000607624 649 ntBASIC1.93□□□□□ -2.1
LSM6P62312 AC107294.1-201ENST00000609524 467 ntBASIC1.93□□□□□ -2.1
LSM6P62312 SCARNA17.4-201ENST00000614296 143 ntBASIC1.93□□□□□ -2.1
LSM6P62312 AC073592.7-201ENST00000623659 507 ntBASIC1.93□□□□□ -2.1
LSM6P62312 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM6P62312 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM6P62312 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
LSM6P62312 DBF4P1-201ENST00000412976 1892 ntBASIC1.92□□□□□ -2.1
LSM6P62312 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LSM6P62312 AC005832.2-201ENST00000538921 1430 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.92□□□□□ -2.1
LSM6P62312 RNU6-619P-201ENST00000365146 108 ntBASIC1.92□□□□□ -2.1
LSM6P62312 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LSM6P62312 RNU6-1083P-201ENST00000384022 107 ntBASIC1.92□□□□□ -2.1
LSM6P62312 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AL445529.1-201ENST00000398713 389 ntBASIC1.92□□□□□ -2.1
LSM6P62312 RNU2-47P-201ENST00000410649 186 ntBASIC1.92□□□□□ -2.1
LSM6P62312 RNU4-53P-201ENST00000410828 140 ntBASIC1.92□□□□□ -2.1
LSM6P62312 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.92□□□□□ -2.1
LSM6P62312 HMGB1P9-201ENST00000429856 646 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC005345.1-201ENST00000431868 217 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC236972.1-201ENST00000433225 199 ntBASIC1.92□□□□□ -2.1
LSM6P62312 UBE2FP3-201ENST00000436366 524 ntBASIC1.92□□□□□ -2.1
LSM6P62312 THAP5P1-201ENST00000439089 262 ntBASIC1.92□□□□□ -2.1
LSM6P62312 OSTCP8-201ENST00000445117 448 ntBASIC1.92□□□□□ -2.1
LSM6P62312 DDX3P2-201ENST00000446138 111 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC090515.1-201ENST00000465295 476 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 AC109486.1-201ENST00000486833 374 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC138853.1-201ENST00000503549 823 ntBASIC1.92□□□□□ -2.1
LSM6P62312 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
LSM6P62312 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LSM6P62312 SCARNA15.2-201ENST00000516409 127 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.92□□□□□ -2.1
LSM6P62312 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.92□□□□□ -2.1
LSM6P62312 AC009063.1-201ENST00000563342 702 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC023824.3-201ENST00000569003 562 ntBASIC1.92□□□□□ -2.1
LSM6P62312 MIR5571-201ENST00000577998 113 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM6P62312 MIR4672-201ENST00000583126 81 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC008498.1-201ENST00000613012 531 ntBASIC1.92□□□□□ -2.1
LSM6P62312 SCARNA15.3-201ENST00000626315 122 ntBASIC1.92□□□□□ -2.1
LSM6P62312 SCARNA4.1-201ENST00000628597 123 ntBASIC1.92□□□□□ -2.1
LSM6P62312 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LSM6P62312 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LSM6P62312 RNU1-73P-201ENST00000383971 164 ntBASIC1.91□□□□□ -2.1
LSM6P62312 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM6P62312 BTF3P7-201ENST00000407097 488 ntBASIC1.91□□□□□ -2.1
LSM6P62312 RNA5SP80-201ENST00000410475 111 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
LSM6P62312 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LSM6P62312 SDR42E1P3-201ENST00000438345 502 ntBASIC1.91□□□□□ -2.1
LSM6P62312 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LSM6P62312 AC092757.1-201ENST00000467293 467 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AC022493.1-201ENST00000492984 337 ntBASIC1.91□□□□□ -2.1
LSM6P62312 COX7A2P2-201ENST00000505291 250 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AC118465.1-201ENST00000513820 1271 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.91□□□□□ -2.1
LSM6P62312 SCARNA16.3-201ENST00000516595 184 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.91□□□□□ -2.1
LSM6P62312 HMGB1P1-201ENST00000522557 636 ntBASIC1.91□□□□□ -2.1
LSM6P62312 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LSM6P62312 AP002770.2-201ENST00000543613 532 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM6P62312 AL391261.3-201ENST00000557194 520 ntBASIC1.91□□□□□ -2.1
LSM6P62312 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM6P62312 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LSM6P62312 AL161729.4-201ENST00000604650 476 ntBASIC1.91□□□□□ -2.1
LSM6P62312 APOOP1-201ENST00000604695 592 ntBASIC1.91□□□□□ -2.1
LSM6P62312 MIR1264-201ENST00000616374 69 ntBASIC1.91□□□□□ -2.1
LSM6P62312 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM6P62312 MIR7157-201ENST00000635801 60 ntBASIC1.91□□□□□ -2.1
LSM6P62312 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
LSM6P62312 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.9□□□□□ -2.1
LSM6P62312 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
LSM6P62312 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LSM6P62312 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LSM6P62312 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
LSM6P62312 MIR634-201ENST00000385208 97 ntBASIC1.9□□□□□ -2.11
LSM6P62312 AL139098.1-201ENST00000407291 389 ntBASIC1.9□□□□□ -2.11
LSM6P62312 HMGB1P11-201ENST00000413899 637 ntBASIC1.9□□□□□ -2.11
LSM6P62312 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM6P62312 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM6P62312 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM6P62312 AL590623.1-201ENST00000427864 105 ntBASIC1.9□□□□□ -2.11
LSM6P62312 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
LSM6P62312 UBE2V2P3-201ENST00000433562 437 ntBASIC1.9□□□□□ -2.11
LSM6P62312 TPTE2P1-204ENST00000435256 593 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms