Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 BX284668.6-201ENST00000606899 438 ntBASIC5.21□□□□□ -1.58
EPHA4P54764 MIR376A1-201ENST00000616574 68 ntBASIC5.21□□□□□ -1.58
EPHA4P54764 uc_338.7-201ENST00000621834 124 ntBASIC5.21□□□□□ -1.58
EPHA4P54764 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.21□□□□□ -1.58
EPHA4P54764 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EPHA4P54764 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.21□□□□□ -1.58
EPHA4P54764 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
EPHA4P54764 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EPHA4P54764 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 RN7SKP185-201ENST00000362813 326 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 SNORD81.1-201ENST00000363064 77 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 SNORA58B-201ENST00000364259 136 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 RNA5SP494-201ENST00000410653 129 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 RNU6-130P-201ENST00000411112 103 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 SNORD56-201ENST00000413522 71 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHA4P54764 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 RPL23AP25-201ENST00000430973 463 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHA4P54764 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHA4P54764 GAPDHP58-201ENST00000438477 1006 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHA4P54764 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 RN7SL329P-201ENST00000467740 299 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AL049874.1-201ENST00000489560 388 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AC021006.3-201ENST00000530771 192 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.2□□□□□ -1.58
EPHA4P54764 AC130289.1-201ENST00000577321 73 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AC006077.1-201ENST00000604746 343 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AC010201.1-201ENST00000605051 540 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AL731566.2-201ENST00000618971 317 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AC068870.2-201ENST00000620635 389 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 AL353748.2-201ENST00000622148 471 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
EPHA4P54764 AL365440.1-201ENST00000436135 2167 ntBASIC5.2□□□□□ -1.58
EPHA4P54764 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EPHA4P54764 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
EPHA4P54764 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
EPHA4P54764 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.2□□□□□ -1.58
EPHA4P54764 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
EPHA4P54764 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.19□□□□□ -1.58
EPHA4P54764 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
EPHA4P54764 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 Y_RNA.65-201ENST00000362846 100 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 SNORA17.1-201ENST00000362945 126 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 U8.4-201ENST00000363626 134 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 Y_RNA.539-201ENST00000384635 107 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 MIR765-201ENST00000390226 114 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AL645927.1-201ENST00000396783 406 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC091286.1-201ENST00000431233 461 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 RPL12P18-201ENST00000437175 325 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHA4P54764 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.19□□□□□ -1.58
EPHA4P54764 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHA4P54764 AC087190.1-201ENST00000484462 480 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC107032.1-201ENST00000485945 480 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC008953.1-201ENST00000497334 318 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHA4P54764 AK3P2-201ENST00000507976 429 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHA4P54764 AP004607.2-201ENST00000533949 322 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.19□□□□□ -1.58
EPHA4P54764 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.19□□□□□ -1.58
EPHA4P54764 MIR4458-201ENST00000578872 75 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 AC006557.5-201ENST00000603126 811 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC009318.2-201ENST00000610917 651 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 AC004792.1-201ENST00000614523 137 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 MIR6730-201ENST00000622213 67 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.19□□□□□ -1.58
EPHA4P54764 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.19□□□□□ -1.58
EPHA4P54764 AC006484.1-201ENST00000435086 1884 ntBASIC5.19□□□□□ -1.58
EPHA4P54764 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
EPHA4P54764 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHA4P54764 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHA4P54764 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EPHA4P54764 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EPHA4P54764 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EPHA4P54764 AL078621.3-201ENST00000623707 2042 ntBASIC5.18□□□□□ -1.58
EPHA4P54764 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EPHA4P54764 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.18□□□□□ -1.58
EPHA4P54764 RNU1-43P-201ENST00000365052 165 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms