Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MTCYBP20-201ENST00000524239 1129 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
SLC6A12P48065 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC090615.1-201ENST00000577519 154 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 AC073648.5-201ENST00000603502 305 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 NDUFA8P1-201ENST00000605525 367 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A12P48065 AC009570.1-201ENST00000609599 745 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 AL589743.7-201ENST00000612637 233 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 U6.105-201ENST00000637379 88 ntBASIC3.2□□□□□ -1.9
SLC6A12P48065 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A12P48065 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A12P48065 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A12P48065 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC6A12P48065 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC6A12P48065 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A12P48065 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SLC6A12P48065 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC6A12P48065 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC6A12P48065 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 RIOK3P1-201ENST00000418778 1528 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC009812.4-201ENST00000569134 1805 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 RNU1-33P-201ENST00000364249 162 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 RNU2-43P-201ENST00000410306 190 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 RNU6-1077P-201ENST00000410506 102 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 BX323014.1-201ENST00000412876 237 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AF274854.1-201ENST00000413236 615 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 PAXBP1P1-201ENST00000449315 447 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 MTND1P27-201ENST00000451117 902 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 AC104308.1-201ENST00000454621 333 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A12P48065 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.19□□□□□ -1.9
SLC6A12P48065 VN1R104P-201ENST00000505115 1009 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A12P48065 SNORA70.16-201ENST00000516390 95 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC6A12P48065 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC6A12P48065 ZNF519P3-201ENST00000557158 1032 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 MIR4276-201ENST00000584832 70 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A12P48065 SEPT7P9-203ENST00000604116 343 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC112191.3-201ENST00000604371 277 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC098614.4-201ENST00000607601 462 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SLC6A12P48065 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
SLC6A12P48065 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A12P48065 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC6A12P48065 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC6A12P48065 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
SLC6A12P48065 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A12P48065 FRG1BP-201ENST00000278882 761 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 RNU6-533P-201ENST00000384144 107 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 MIR493-201ENST00000385254 89 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 Y_RNA.608-201ENST00000410647 95 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 RNA5SP107-201ENST00000411358 122 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 MTCO1P17-201ENST00000411522 491 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A12P48065 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A12P48065 BX890604.2-201ENST00000427883 474 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AL159987.2-201ENST00000432754 307 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AC024082.2-201ENST00000434771 238 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC6A12P48065 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A12P48065 USP9YP12-201ENST00000450481 570 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AL590365.1-201ENST00000450788 243 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC6A12P48065 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC6A12P48065 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC6A12P48065 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 AC108860.1-201ENST00000484521 383 ntBASIC3.18□□□□□ -1.9
SLC6A12P48065 RNU6-1003P-201ENST00000517099 105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms