Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 uc_338.25-201ENST00000613756 156 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC068831.7-201ENST00000616954 363 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC026585.1-201ENST00000619582 524 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC8P31273 AC084035.1-201ENST00000634543 607 ntBASIC3.52□□□□□ -1.85
HOXC8P31273 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.52□□□□□ -1.85
HOXC8P31273 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC8P31273 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HOXC8P31273 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC8P31273 DEFB108F-201ENST00000344638 222 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 RNU6-501P-201ENST00000364072 100 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXC8P31273 FAT1P1-201ENST00000406588 507 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 RN7SKP220-201ENST00000410611 288 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 MTCO3P41-201ENST00000414801 328 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC8P31273 AL365184.2-201ENST00000431139 435 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC236972.1-201ENST00000433225 199 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC8P31273 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC8P31273 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC8P31273 AC012181.1-201ENST00000479895 423 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC8P31273 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC8P31273 AL359273.1-201ENST00000510918 627 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC8P31273 AC017037.2-201ENST00000513850 890 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC093677.1-201ENST00000514414 678 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 RNU6-714P-201ENST00000516963 103 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 DEFB108D-201ENST00000527787 222 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC8P31273 AL163153.1-201ENST00000554223 283 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 PCMTD1P2-201ENST00000565017 355 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC136618.2-201ENST00000575091 400 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 MIR4474-201ENST00000579189 78 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AP001004.1-201ENST00000582468 324 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC103710.4-201ENST00000609301 899 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC012360.2-201ENST00000609349 391 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC010678.1-201ENST00000614118 713 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 AC002076.2-201ENST00000617362 122 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC8P31273 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXC8P31273 AC005832.2-201ENST00000538921 1430 ntBASIC3.51□□□□□ -1.85
HOXC8P31273 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC8P31273 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC8P31273 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 RNU6-462P-201ENST00000362659 105 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 Y_RNA.359-201ENST00000365498 102 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC8P31273 Y_RNA.505-201ENST00000384489 102 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 RNY3P10-201ENST00000384764 102 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HOXC8P31273 AL356421.1-201ENST00000403255 413 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC109780.2-201ENST00000413467 845 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 HMGB1P11-201ENST00000413899 637 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC8P31273 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC8P31273 USP9YP29-201ENST00000445112 563 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 BMI1P1-201ENST00000445879 941 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 ELOCP30-201ENST00000447108 299 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC8P31273 AC026801.2-201ENST00000515352 425 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC090136.1-201ENST00000520009 240 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC8P31273 AC022690.1-201ENST00000526681 550 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC8P31273 AC022880.1-201ENST00000534017 973 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC8P31273 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.5□□□□□ -1.85
HOXC8P31273 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC8P31273 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 MIR548AB-201ENST00000584917 84 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 AC068790.6-201ENST00000602558 258 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC008962.1-201ENST00000605729 304 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC068276.1-201ENST00000605793 379 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC8P31273 AC025594.3-201ENST00000613068 790 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 ATP5A1P2-202ENST00000616464 443 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC099842.1-201ENST00000619919 596 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC002550.2-201ENST00000621246 394 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 MIR6852-201ENST00000621699 66 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC006386.2-201ENST00000624491 75 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC012005.1-201ENST00000624575 75 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 AC025048.6-202ENST00000627667 438 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC8P31273 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC8P31273 AC092326.2-201ENST00000624772 1561 ntBASIC3.5□□□□□ -1.85
HOXC8P31273 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
HOXC8P31273 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC8P31273 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC8P31273 RNU6-359P-201ENST00000365466 108 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms