Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PTP4A1P7-201ENST00000423476 514 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC092047.1-201ENST00000424997 240 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL1P09341 HMGB1P9-201ENST00000429856 646 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.52□□□□□ -2.17
CXCL1P09341 AL049734.2-201ENST00000441066 616 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 PIGFP3-201ENST00000441918 722 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.52□□□□□ -2.17
CXCL1P09341 AL929288.2-201ENST00000446368 407 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL1P09341 DYNLL1P5-201ENST00000467158 270 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC055731.1-201ENST00000474387 401 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC034222.1-201ENST00000494052 532 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL1P09341 AC022447.3-201ENST00000506865 495 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL1P09341 RNA5SP281-201ENST00000516504 135 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC025918.2-201ENST00000558683 763 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC012414.2-201ENST00000559474 187 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 SULT1C2P1-202ENST00000562418 459 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 GAS5-AS1-201ENST00000602767 694 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC025588.2-201ENST00000604851 466 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AC096586.1-201ENST00000610267 561 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 SDR42E1P2-201ENST00000614861 481 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CXCL1P09341 SDR42E1P4-201ENST00000620894 481 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.52□□□□□ -2.17
CXCL1P09341 AC092881.1-201ENST00000638218 2733 ntBASIC1.52□□□□□ -2.17
CXCL1P09341 MTCO1P23-201ENST00000415223 1526 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CXCL1P09341 FTLP6-201ENST00000355274 422 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 RNU6-251P-201ENST00000363235 104 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 RNU6-115P-201ENST00000364310 107 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 SNORD115-48-201ENST00000364764 76 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 RNU6-619P-201ENST00000365146 108 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 SNORA36C-201ENST00000384289 132 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 MIR325-201ENST00000385260 98 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CXCL1P09341 U3.26-201ENST00000391236 204 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 CIR1P3-201ENST00000405137 479 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 RNA5SP80-201ENST00000410475 111 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 FCF1P2-201ENST00000415284 583 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AC027124.2-201ENST00000428249 105 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.51□□□□□ -2.17
CXCL1P09341 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CXCL1P09341 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.51□□□□□ -2.17
CXCL1P09341 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.51□□□□□ -2.17
CXCL1P09341 SCARNA15.2-201ENST00000516409 127 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 SNORA31.25-201ENST00000517242 134 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AC010186.2-204ENST00000537668 439 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AC234778.2-201ENST00000566241 354 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.51□□□□□ -2.17
CXCL1P09341 AL031176.1-201ENST00000604554 466 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AC080013.4-201ENST00000607624 649 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 AP003485.2-201ENST00000623636 610 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.51□□□□□ -2.17
CXCL1P09341 ZNF355P-201ENST00000427301 3216 ntBASIC1.51□□□□□ -2.17
CXCL1P09341 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
CXCL1P09341 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CXCL1P09341 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CXCL1P09341 RNU6-1083P-201ENST00000384022 107 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 CYCSP48-201ENST00000417124 323 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 RPL31P63-201ENST00000422565 375 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL1P09341 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 SDCBPP1-201ENST00000440192 890 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 BNIP3P2-201ENST00000441221 577 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 OR10R1P-201ENST00000441524 1141 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC124916.1-201ENST00000444020 547 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AL672167.3-201ENST00000465951 960 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC072039.1-201ENST00000477611 581 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 HSPE1P6-201ENST00000479457 291 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC138853.1-201ENST00000503549 823 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 HMGB3P17-201ENST00000504195 649 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC118465.1-201ENST00000513820 1271 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC103783.1-201ENST00000520506 373 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AP002748.2-201ENST00000528671 348 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CXCL1P09341 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms