Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-1053P-201ENST00000515930 101 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 SNORA31.20-201ENST00000517111 133 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.85□□□□□ -2.11
COL4A2P08572 AP003385.6-201ENST00000531603 374 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 AC126177.3-201ENST00000551839 688 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A2P08572 AC087481.2-201ENST00000565492 330 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A2P08572 AC098483.2-201ENST00000603158 454 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 AC025588.3-201ENST00000604182 274 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
COL4A2P08572 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A2P08572 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A2P08572 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A2P08572 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A2P08572 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A2P08572 RNU6-115P-201ENST00000364310 107 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 RNU6-619P-201ENST00000365146 108 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 RNU6-549P-201ENST00000384433 107 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 MIR7-2-201ENST00000384970 110 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 MIR1323-201ENST00000408090 73 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A2P08572 TAF13P2-201ENST00000416876 286 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 TOMM22P1-201ENST00000418578 312 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A2P08572 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A2P08572 RABEPKP1-201ENST00000440529 1026 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AL158053.1-201ENST00000441503 453 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AL031659.1-201ENST00000447075 539 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 RNU7-140P-201ENST00000459546 60 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A2P08572 AC104472.2-201ENST00000469035 601 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC010285.1-201ENST00000470580 392 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC140059.1-201ENST00000489238 361 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 RPL23AP55-201ENST00000498163 452 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 HMGB1P22-201ENST00000505315 124 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A2P08572 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A2P08572 CBX3P4-201ENST00000538909 354 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A2P08572 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A2P08572 SUB1P3-201ENST00000564581 315 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A2P08572 AL669831.4-202ENST00000590817 238 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AL121917.1-203ENST00000605534 577 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AL391813.2-201ENST00000609113 322 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 AC078880.5-201ENST00000617845 421 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.84□□□□□ -2.11
COL4A2P08572 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A2P08572 AC103988.1-201ENST00000566382 2177 ntBASIC1.84□□□□□ -2.12
COL4A2P08572 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.84□□□□□ -2.12
COL4A2P08572 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
COL4A2P08572 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
COL4A2P08572 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
COL4A2P08572 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-374P-201ENST00000364146 108 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-353P-201ENST00000364266 108 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-609P-201ENST00000365459 107 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AP000567.1-201ENST00000406413 156 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 RNU2-72P-201ENST00000411175 163 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC099677.1-201ENST00000420575 175 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 UBE2D3P3-201ENST00000426992 425 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC009414.1-201ENST00000427200 443 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL512637.2-201ENST00000431287 1256 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 MTND4LP10-201ENST00000435146 291 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 snoU13.4-201ENST00000458916 104 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RPL32P14-201ENST00000463196 378 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
COL4A2P08572 VPS26AP1-201ENST00000483197 979 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A2P08572 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A2P08572 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 ARL2BPP5-201ENST00000523141 481 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A2P08572 COX6CP5-201ENST00000527162 228 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 CYB5AP5-201ENST00000549779 389 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A2P08572 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A2P08572 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC005776.1-201ENST00000603164 290 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC073968.1-201ENST00000618594 637 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A2P08572 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A2P08572 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A2P08572 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A2P08572 UBE2L2-201ENST00000254302 429 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms