Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 AC025253.1-201ENST00000613623 543 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 MIR7111-201ENST00000619751 72 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL2A1P02458 MTND4P12-201ENST00000498999 1377 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 OR11H5P-202ENST00000641612 1325 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC007336.1-201ENST00000576365 3828 ntBASIC3.23□□□□□ -1.89
COL2A1P02458 AC092593.1-201ENST00000515413 1815 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 Y_RNA.61-201ENST00000362835 102 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 Y_RNA.311-201ENST00000365068 96 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 HMGN1P14-201ENST00000412459 517 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 USP12PX-201ENST00000432383 1057 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 CBX1P4-201ENST00000439415 457 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 RFC5P1-201ENST00000454419 874 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RNA5SP269-201ENST00000459032 137 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC117522.1-201ENST00000509821 380 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC025465.4-201ENST00000513422 638 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RN7SKP298-201ENST00000515950 94 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC087808.1-201ENST00000520501 361 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC083923.1-201ENST00000523708 376 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AP001646.1-201ENST00000527936 915 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 HPRT1P3-201ENST00000539521 576 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AP002770.2-201ENST00000543613 532 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 OR4K7P-201ENST00000580232 945 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 BNIP3P4-201ENST00000604946 565 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC012360.2-201ENST00000609349 391 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AL158209.2-201ENST00000619266 216 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC004009.2-201ENST00000623016 728 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL2A1P02458 U6.107-201ENST00000637108 79 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 FAM157B-203ENST00000639350 358 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 AP006437.1-201ENST00000641440 3685 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL2A1P02458 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 DDX18P3-201ENST00000404856 2007 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 Y_RNA.302-201ENST00000364997 102 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RNU6-876P-201ENST00000391295 104 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 CCNG1P1-201ENST00000406783 885 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 SNORA3.2-201ENST00000408221 125 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 USP9YP18-201ENST00000425912 695 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC093716.1-201ENST00000435923 377 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 FGF7P6-202ENST00000451282 293 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 RPL23AP14-201ENST00000468281 468 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC078817.1-201ENST00000492623 435 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL2A1P02458 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 RNY4P37-201ENST00000516225 96 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RNU6-416P-201ENST00000516265 103 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC118273.2-201ENST00000532092 465 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AP002453.2-201ENST00000533503 320 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 RAB11AP2-201ENST00000545905 639 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 OR7K1P-201ENST00000546439 926 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.22□□□□□ -1.89
COL2A1P02458 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.22□□□□□ -1.89
COL2A1P02458 C8orf59P2-201ENST00000603441 271 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC019131.2-201ENST00000609071 870 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 AC138649.3-201ENST00000622154 254 ntBASIC3.22□□□□□ -1.89
COL2A1P02458 MTND4P16-201ENST00000466108 1367 ntBASIC3.21□□□□□ -1.89
COL2A1P02458 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL2A1P02458 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.21□□□□□ -1.9
COL2A1P02458 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
COL2A1P02458 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
COL2A1P02458 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
COL2A1P02458 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL2A1P02458 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
COL2A1P02458 FGF7P2-201ENST00000332473 296 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 Y_RNA.453-201ENST00000384223 109 ntBASIC3.21□□□□□ -1.9
COL2A1P02458 RNU6-452P-201ENST00000384406 107 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms