Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC133104.1-201ENST00000429100 218 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 HMGB3P12-201ENST00000438745 556 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC009237.8-201ENST00000445492 379 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 CBWD4P-201ENST00000445695 655 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 RPS3AP46-201ENST00000448352 682 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 HMGN1P11-201ENST00000508668 303 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 SNORA31.3-201ENST00000516029 96 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 RNU6-927P-201ENST00000516199 100 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 RNU6-1092P-201ENST00000516955 87 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AP006245.1-201ENST00000522549 120 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.33□□□□□ -1.88
NKX2-2O95096 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC106785.1-201ENST00000565935 262 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC004223.2-201ENST00000590309 544 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 GLUD1P4-201ENST00000590914 418 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 MIR98-201ENST00000606724 119 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC009570.1-201ENST00000609599 745 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-2O95096 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.33□□□□□ -1.88
NKX2-2O95096 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC066616.2-201ENST00000559334 1481 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 AL161912.2-201ENST00000565707 3007 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-2O95096 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NKX2-2O95096 RNA5SP295-201ENST00000362655 121 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 RNU6-960P-201ENST00000364056 120 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-2O95096 RNU6-39P-201ENST00000384344 107 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 MIR558-201ENST00000384920 94 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 NDUFS5P1-201ENST00000405668 289 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AL445189.1-201ENST00000405722 338 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 CYCSP19-201ENST00000411715 316 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AL035423.1-201ENST00000420331 213 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC091390.3-201ENST00000426478 338 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AL445584.1-201ENST00000431451 330 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-2O95096 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC023598.1-201ENST00000472521 361 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC084357.1-201ENST00000473404 255 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 RNU6-1220P-201ENST00000517126 108 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC090572.1-201ENST00000519251 160 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AP006587.4-201ENST00000526053 529 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC010546.1-201ENST00000569391 485 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC093227.2-201ENST00000589357 285 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC087241.4-201ENST00000612441 480 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AL392088.2-201ENST00000637607 285 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AC119674.1-207ENST00000641355 633 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC092447.7-201ENST00000422212 1621 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
NKX2-2O95096 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NKX2-2O95096 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NKX2-2O95096 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 CUL1P1-201ENST00000509510 2425 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
NKX2-2O95096 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC007823.1-201ENST00000569932 1566 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 SNORD6-201ENST00000365444 73 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms