Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SUMO2P15-201ENST00000604285 278 ntBASIC6.04□□□□□ -1.44
RNF40O75150 SNORD91B-202ENST00000608459 222 ntBASIC6.04□□□□□ -1.44
RNF40O75150 AL049539.1-201ENST00000611964 459 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RN7SL544P-201ENST00000617232 284 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RN7SL763P-201ENST00000620922 284 ntBASIC6.04□□□□□ -1.44
RNF40O75150 IGHVIII-44-202ENST00000636235 289 ntBASIC6.04□□□□□ -1.44
RNF40O75150 MIR4679-1-201ENST00000637619 75 ntBASIC6.04□□□□□ -1.44
RNF40O75150 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
RNF40O75150 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF40O75150 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 AL109809.4-201ENST00000603520 2185 ntBASIC6.04□□□□□ -1.44
RNF40O75150 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RNF40O75150 ABCC13-202ENST00000463099 3842 ntBASIC6.04□□□□□ -1.44
RNF40O75150 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 AL445487.1-201ENST00000415694 1580 ntBASIC6.03□□□□□ -1.44
RNF40O75150 RNU6-827P-201ENST00000365553 106 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC019155.1-201ENST00000382242 574 ntBASIC6.03□□□□□ -1.44
RNF40O75150 RNA5SP91-201ENST00000390902 119 ntBASIC6.03□□□□□ -1.44
RNF40O75150 MRPL53P1-201ENST00000414323 319 ntBASIC6.03□□□□□ -1.44
RNF40O75150 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.03□□□□□ -1.44
RNF40O75150 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF40O75150 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF40O75150 UQCRBP2-201ENST00000447827 297 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC091179.1-201ENST00000461606 579 ntBASIC6.03□□□□□ -1.44
RNF40O75150 RN7SL515P-201ENST00000463999 297 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF40O75150 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 AC010683.1-201ENST00000473673 378 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF40O75150 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.03□□□□□ -1.44
RNF40O75150 EDDM3DP-201ENST00000554692 434 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC233702.2-202ENST00000562547 291 ntBASIC6.03□□□□□ -1.44
RNF40O75150 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF40O75150 AL450472.3-201ENST00000615578 367 ntBASIC6.03□□□□□ -1.44
RNF40O75150 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 AC005005.4-201ENST00000623789 16698 ntBASIC6.03□□□□□ -1.44
RNF40O75150 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF40O75150 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF40O75150 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.02□□□□□ -1.44
RNF40O75150 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RNF40O75150 GVINP1-202ENST00000531871 7271 ntBASIC6.02□□□□□ -1.45
RNF40O75150 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RNF40O75150 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF40O75150 PRO1804-201ENST00000623780 2050 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AC083843.3-201ENST00000623679 2186 ntBASIC6.02□□□□□ -1.45
RNF40O75150 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF40O75150 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF40O75150 RNU5B-2P-201ENST00000363036 113 ntBASIC6.02□□□□□ -1.45
RNF40O75150 MIR186-201ENST00000384988 86 ntBASIC6.02□□□□□ -1.45
RNF40O75150 DUTP5-201ENST00000406790 469 ntBASIC6.02□□□□□ -1.45
RNF40O75150 BMS1P17-202ENST00000416720 316 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.02□□□□□ -1.45
RNF40O75150 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF40O75150 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF40O75150 RPS23P6-201ENST00000466136 431 ntBASIC6.02□□□□□ -1.45
RNF40O75150 SNORA27.4-201ENST00000516650 95 ntBASIC6.02□□□□□ -1.45
RNF40O75150 SNORA43.3-201ENST00000517240 103 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AK6P2-201ENST00000549020 471 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF40O75150 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RNF40O75150 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF40O75150 AC011487.3-201ENST00000593607 453 ntBASIC6.02□□□□□ -1.45
RNF40O75150 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF40O75150 AC211433.2-201ENST00000608433 387 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AC010632.3-201ENST00000611377 369 ntBASIC6.02□□□□□ -1.45
RNF40O75150 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.02□□□□□ -1.45
RNF40O75150 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF40O75150 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF40O75150 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF40O75150 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF40O75150 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF40O75150 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
RNF40O75150 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RNF40O75150 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RNF40O75150 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 OR4G2P-202ENST00000641004 1759 ntBASIC6.01□□□□□ -1.45
RNF40O75150 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.01□□□□□ -1.45
RNF40O75150 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF40O75150 RNU6-384P-201ENST00000364900 104 ntBASIC6.01□□□□□ -1.45
RNF40O75150 Y_RNA.446-201ENST00000384178 104 ntBASIC6.01□□□□□ -1.45
RNF40O75150 MIR105-2-201ENST00000385083 81 ntBASIC6.01□□□□□ -1.45
RNF40O75150 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RNF40O75150 HSPA8P15-201ENST00000401676 786 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms