Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.97□□□□□ -1.77
PHGDHO43175 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.97□□□□□ -1.77
PHGDHO43175 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC024619.4-201ENST00000580924 316 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 MIR4775-201ENST00000581168 75 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC067852.3-201ENST00000589177 561 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC002545.1-201ENST00000592511 181 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 IPO5P1-202ENST00000600039 287 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 AC106900.2-201ENST00000604994 317 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 AC002553.4-201ENST00000616896 331 ntBASIC3.97□□□□□ -1.77
PHGDHO43175 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 FER-210ENST00000628534 558 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHGDHO43175 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
PHGDHO43175 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PHGDHO43175 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
PHGDHO43175 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PHGDHO43175 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.77
PHGDHO43175 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PHGDHO43175 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.96□□□□□ -1.78
PHGDHO43175 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PHGDHO43175 Y_RNA.390-201ENST00000383932 102 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 RNU6-1029P-201ENST00000384109 107 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 RNU6-908P-201ENST00000410160 94 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 AC016397.1-201ENST00000412463 242 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 MTCYBP8-201ENST00000422855 651 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 RPL27AP8-201ENST00000424277 446 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.96□□□□□ -1.78
PHGDHO43175 HMGB1P27-201ENST00000431429 603 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 GTF2IP20-201ENST00000431663 360 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 CACYBPP2-201ENST00000453625 678 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.96□□□□□ -1.78
PHGDHO43175 RPL21P104-201ENST00000464143 478 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PHGDHO43175 CEACAMP10-202ENST00000495431 496 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 PRDX4P1-201ENST00000507189 574 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 RNA5SP401-201ENST00000515920 127 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.96□□□□□ -1.78
PHGDHO43175 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.96□□□□□ -1.78
PHGDHO43175 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.96□□□□□ -1.78
PHGDHO43175 AC135001.1-201ENST00000544546 283 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PHGDHO43175 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.96□□□□□ -1.78
PHGDHO43175 AC104763.2-201ENST00000604179 382 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 ARF4P1-201ENST00000605447 541 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 API5P2-201ENST00000397055 1498 ntBASIC3.96□□□□□ -1.78
PHGDHO43175 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.96□□□□□ -1.78
PHGDHO43175 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PHGDHO43175 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
PHGDHO43175 IPO8P1-201ENST00000455509 3109 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PHGDHO43175 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHGDHO43175 Y_RNA.255-201ENST00000364581 97 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 DEFB109C-201ENST00000382575 264 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 DEFB109B-201ENST00000382656 264 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 Y_RNA.604-201ENST00000410574 102 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AL356867.1-201ENST00000429623 299 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.95□□□□□ -1.78
PHGDHO43175 AL353572.1-201ENST00000442490 417 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 MTND1P18-201ENST00000448191 573 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.95□□□□□ -1.78
PHGDHO43175 AL162395.1-201ENST00000457882 422 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.95□□□□□ -1.78
PHGDHO43175 GMFBP1-201ENST00000467831 427 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 RPL31P60-201ENST00000478450 367 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AC105137.1-201ENST00000484355 562 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AL163973.1-201ENST00000484753 577 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 FTH1P9-201ENST00000513251 355 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 SCARNA15.2-201ENST00000516409 127 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 RNU6-1256P-201ENST00000516539 103 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 RNA5SP468-201ENST00000516782 93 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 RN7SKP60-201ENST00000516985 239 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 NARSP2-201ENST00000518524 679 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.95□□□□□ -1.78
PHGDHO43175 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.95□□□□□ -1.78
PHGDHO43175 OR5B10P-201ENST00000532869 642 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms