Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHD2O14647 AP002907.1-201ENST00000606361 1430 ntBASIC2.41□□□□□ -2.02
CHD2O14647 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
CHD2O14647 MTND4P23-201ENST00000447723 1363 ntBASIC2.4□□□□□ -2.02
CHD2O14647 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHD2O14647 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
CHD2O14647 RNU4-13P-201ENST00000364019 141 ntBASIC2.4□□□□□ -2.02
CHD2O14647 RNU6-53P-201ENST00000365367 106 ntBASIC2.4□□□□□ -2.02
CHD2O14647 RNU6-1077P-201ENST00000410506 102 ntBASIC2.4□□□□□ -2.02
CHD2O14647 HMGB3P2-201ENST00000411913 584 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AL355994.1-201ENST00000424379 260 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AC114973.1-201ENST00000429057 632 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.4□□□□□ -2.02
CHD2O14647 AL645638.1-201ENST00000440519 361 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.4□□□□□ -2.02
CHD2O14647 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.4□□□□□ -2.02
CHD2O14647 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.4□□□□□ -2.02
CHD2O14647 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CHD2O14647 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CHD2O14647 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.4□□□□□ -2.02
CHD2O14647 AC239860.2-201ENST00000525886 270 ntBASIC2.4□□□□□ -2.02
CHD2O14647 EEF1B2P4-201ENST00000551398 348 ntBASIC2.4□□□□□ -2.02
CHD2O14647 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.4□□□□□ -2.02
CHD2O14647 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AP005136.1-201ENST00000579765 429 ntBASIC2.4□□□□□ -2.02
CHD2O14647 AC012254.4-201ENST00000588843 273 ntBASIC2.4□□□□□ -2.02
CHD2O14647 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHD2O14647 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CHD2O14647 SGO1P2-201ENST00000429458 1589 ntBASIC2.4□□□□□ -2.03
CHD2O14647 RNU6-821P-201ENST00000390995 107 ntBASIC2.4□□□□□ -2.03
CHD2O14647 RNU6-712P-201ENST00000410558 100 ntBASIC2.4□□□□□ -2.03
CHD2O14647 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.4□□□□□ -2.03
CHD2O14647 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.4□□□□□ -2.03
CHD2O14647 MTND2P19-201ENST00000449129 1012 ntBASIC2.4□□□□□ -2.03
CHD2O14647 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHD2O14647 HMGN2P13-201ENST00000476476 274 ntBASIC2.4□□□□□ -2.03
CHD2O14647 HIGD1AP6-201ENST00000521833 279 ntBASIC2.4□□□□□ -2.03
CHD2O14647 AL163153.1-201ENST00000554223 283 ntBASIC2.4□□□□□ -2.03
CHD2O14647 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.4□□□□□ -2.03
CHD2O14647 SNORA4-201ENST00000584302 138 ntBASIC2.4□□□□□ -2.03
CHD2O14647 AC095031.1-201ENST00000623685 672 ntBASIC2.4□□□□□ -2.03
CHD2O14647 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHD2O14647 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHD2O14647 Y_RNA.224-201ENST00000364308 111 ntBASIC2.39□□□□□ -2.03
CHD2O14647 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CHD2O14647 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD2O14647 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD2O14647 RPP40P1-201ENST00000426762 456 ntBASIC2.39□□□□□ -2.03
CHD2O14647 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.39□□□□□ -2.03
CHD2O14647 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AMD1P1-201ENST00000457220 922 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AC109464.2-201ENST00000510242 943 ntBASIC2.39□□□□□ -2.03
CHD2O14647 RNU6-27P-201ENST00000516146 107 ntBASIC2.39□□□□□ -2.03
CHD2O14647 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD2O14647 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.39□□□□□ -2.03
CHD2O14647 AC087481.2-201ENST00000565492 330 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.39□□□□□ -2.03
CHD2O14647 AC019159.1-201ENST00000605094 187 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AC016542.1-201ENST00000608259 493 ntBASIC2.39□□□□□ -2.03
CHD2O14647 RMST_2.1-201ENST00000617263 136 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AL163051.2-201ENST00000618976 735 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AC006249.1-201ENST00000621223 471 ntBASIC2.39□□□□□ -2.03
CHD2O14647 AC097372.4-201ENST00000625025 466 ntBASIC2.39□□□□□ -2.03
CHD2O14647 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHD2O14647 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHD2O14647 AL391987.6-201ENST00000305671 199 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RNU6-543P-201ENST00000362576 108 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RNU6-251P-201ENST00000363235 104 ntBASIC2.38□□□□□ -2.03
CHD2O14647 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD2O14647 AC090255.1-201ENST00000495779 349 ntBASIC2.38□□□□□ -2.03
CHD2O14647 ARL4AP2-201ENST00000507378 601 ntBASIC2.38□□□□□ -2.03
CHD2O14647 PRELID3BP4-201ENST00000515476 571 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD2O14647 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD2O14647 KATNBL1P1-201ENST00000605192 748 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AL512598.1-201ENST00000610158 273 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RMST_6.1-201ENST00000611980 203 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC106730.3-201ENST00000624568 641 ntBASIC2.38□□□□□ -2.03
CHD2O14647 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD2O14647 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD2O14647 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.38□□□□□ -2.03
CHD2O14647 SNORA51.6-201ENST00000384151 125 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RPL7P30-201ENST00000420888 709 ntBASIC2.38□□□□□ -2.03
CHD2O14647 RFESDP1-201ENST00000422350 461 ntBASIC2.38□□□□□ -2.03
CHD2O14647 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD2O14647 AL021397.1-201ENST00000451806 248 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC087441.2-201ENST00000529141 262 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD2O14647 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD2O14647 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
CHD2O14647 AC055876.5-201ENST00000605667 259 ntBASIC2.38□□□□□ -2.03
CHD2O14647 AC096586.1-201ENST00000610267 561 ntBASIC2.38□□□□□ -2.03
CHD2O14647 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHD2O14647 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHD2O14647 SNORA14A-201ENST00000364773 135 ntBASIC2.37□□□□□ -2.03
CHD2O14647 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms