Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL133153.1-201ENST00000557756 303 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC120057.2-201ENST00000571520 271 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 RPS3AP23-202ENST00000574601 686 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 MIR4795-201ENST00000584182 89 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AC008250.2-201ENST00000615261 205 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 AL359880.1-201ENST00000621879 266 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 CR392039.5-201ENST00000623201 510 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 MTND5P42-201ENST00000637720 498 ntBASIC4.03□□□□□ -1.76
TRIM38O00635 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM38O00635 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
TRIM38O00635 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM38O00635 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 AC138915.3-201ENST00000562908 1389 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 RNU5E-8P-201ENST00000363502 116 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 AL356776.1-201ENST00000406574 447 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MIR1302-11-201ENST00000408051 138 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MIR1302-9-201ENST00000408365 138 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MIR1302-10-201ENST00000408734 138 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 RN7SKP285-201ENST00000410137 318 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 RNA5SP44-201ENST00000410446 133 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 MTND2P23-201ENST00000422990 651 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 PPP1R11P2-201ENST00000423543 382 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC087650.1-201ENST00000431445 468 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 NIPA2P5-201ENST00000452282 464 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 PMCHL2-203ENST00000457791 237 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 RPL38P1-201ENST00000460914 211 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 VN1R104P-201ENST00000505115 1009 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC018710.1-201ENST00000506509 158 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC108078.1-201ENST00000508073 725 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC009646.1-201ENST00000510455 318 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 LRRC34P2-201ENST00000514850 553 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 Y_RNA.672-201ENST00000516289 104 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 RNA5SP309-201ENST00000516670 106 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 DEFB108D-201ENST00000527787 222 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 AP003122.4-201ENST00000530980 758 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 MIR3146-201ENST00000580367 79 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 CKS1BP3-201ENST00000600888 237 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 KC877982.1-201ENST00000602313 470 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL161729.4-201ENST00000604650 476 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AC008277.2-201ENST00000605196 797 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MIR1302-2-201ENST00000607096 138 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 AL050343.2-201ENST00000607338 280 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 uc_338.12-201ENST00000616344 181 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TRIM38O00635 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM38O00635 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
TRIM38O00635 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM38O00635 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM38O00635 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 AL133383.2-201ENST00000622958 2336 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 Y_RNA.279-201ENST00000364763 95 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 SNORA70.4-201ENST00000365509 134 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 RNU6-76P-201ENST00000384060 104 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 MRPL42P2-201ENST00000403169 426 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 RNU2-37P-201ENST00000410695 177 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 AC024082.2-201ENST00000434771 238 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms