Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AC090774.1-201ENST00000435925 246 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AL008629.1-201ENST00000438615 184 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.86□□□□□ -1.95
PDLIM1O00151 RPL26P6-201ENST00000440913 438 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AP000542.1-201ENST00000448473 371 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 ELOCP23-201ENST00000452014 332 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AL031183.1-201ENST00000457667 207 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC106872.3-201ENST00000495104 446 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.86□□□□□ -1.95
PDLIM1O00151 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM1O00151 SNORA70.16-201ENST00000516390 95 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC090136.1-201ENST00000520009 240 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AP003497.1-201ENST00000528472 562 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC136618.2-201ENST00000575091 400 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 MIR5680-201ENST00000577577 84 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 MIR5004-201ENST00000579078 107 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AC004067.1-201ENST00000608733 700 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AC104237.2-201ENST00000612456 443 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AC140725.3-201ENST00000616193 880 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 AL138880.2-201ENST00000616214 239 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 MIR6130-201ENST00000619419 109 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.86□□□□□ -1.95
PDLIM1O00151 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM1O00151 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
PDLIM1O00151 AC073346.2-201ENST00000624724 2058 ntBASIC2.86□□□□□ -1.95
PDLIM1O00151 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
PDLIM1O00151 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM1O00151 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM1O00151 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM1O00151 RNU5A-1-201ENST00000362698 116 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 RNU6-799P-201ENST00000363567 107 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM1O00151 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM1O00151 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM1O00151 RNU6-637P-201ENST00000384050 107 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 RNU6-76P-201ENST00000384060 104 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDLIM1O00151 RN7SKP266-201ENST00000410232 287 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 RNU4-47P-201ENST00000410876 114 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 HMGB1P11-201ENST00000413899 637 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC098592.1-201ENST00000419352 333 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM1O00151 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM1O00151 AC091862.1-201ENST00000438016 1100 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM1O00151 MTND1P9-201ENST00000453775 944 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 BX510359.1-201ENST00000456973 237 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM1O00151 AC072039.1-201ENST00000477611 581 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC109925.1-201ENST00000478069 331 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 RPL31P60-201ENST00000478450 367 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 LINC00888-204ENST00000487386 421 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM1O00151 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PDLIM1O00151 TBCAP3-201ENST00000512475 312 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM1O00151 HMGN1P28-201ENST00000521340 364 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.85□□□□□ -1.95
PDLIM1O00151 OR7K1P-201ENST00000546439 926 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM1O00151 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM1O00151 MIR5194-201ENST00000582634 120 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC105224.1-201ENST00000587055 421 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC019159.1-201ENST00000605094 187 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC103710.4-201ENST00000609301 899 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AL355816.2-201ENST00000610049 647 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AL442067.2-201ENST00000614033 363 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AC009159.2-201ENST00000617603 606 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 AL031667.3-201ENST00000620124 655 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM1O00151 AC079597.1-201ENST00000624306 508 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 PCMTD1P7-201ENST00000634506 357 ntBASIC2.85□□□□□ -1.95
PDLIM1O00151 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
PDLIM1O00151 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.95
PDLIM1O00151 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM1O00151 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM1O00151 RNU6-433P-201ENST00000363216 104 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 Y_RNA.302-201ENST00000364997 102 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AL590084.2-201ENST00000401481 382 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 RNU6-516P-201ENST00000411381 104 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 OR6C5P-201ENST00000452388 923 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AL049714.1-201ENST00000466686 347 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AC009901.1-201ENST00000506703 541 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AC022447.3-201ENST00000506865 495 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 RPL37P25-201ENST00000507308 276 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AC109464.2-201ENST00000510242 943 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms