Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
USP17L3A6NCW0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.71□□□□□ -1.5
USP17L3A6NCW0 MAPK10-328ENST00000641553 4009 ntBASIC5.71□□□□□ -1.5
USP17L3A6NCW0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 OR14L1P-202ENST00000641545 3009 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU6-238P-201ENST00000363313 106 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU6-1059P-201ENST00000363752 98 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU6-1329P-201ENST00000365664 107 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 MT-TR-201ENST00000387439 65 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU2-23P-201ENST00000410545 195 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AC096664.2-201ENST00000411843 406 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RPL21P90-201ENST00000415692 466 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU7-187P-201ENST00000458985 68 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AC068781.1-201ENST00000488231 618 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RN7SL283P-201ENST00000489055 303 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RPL36AP41-201ENST00000493820 306 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 RNU6-120P-201ENST00000516077 103 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AC109446.1-201ENST00000566172 220 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 MIR3160-1-201ENST00000577972 85 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 MIR3939-201ENST00000582614 106 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 ELOCP5-201ENST00000604924 333 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AP005019.3-201ENST00000620418 560 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 U3.53-201ENST00000628922 216 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AC009643.2-201ENST00000603543 1448 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AC026523.2-201ENST00000625039 7739 ntBASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP17L3A6NCW0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 RNU6-371P-201ENST00000364283 108 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 SNORA71.2-201ENST00000364941 134 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 Z98949.2-201ENST00000440996 144 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC011816.1-201ENST00000441346 546 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AL589765.3-201ENST00000446084 462 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 RNU6-914P-201ENST00000516749 109 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC008489.1-201ENST00000524271 483 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AL606534.2-204ENST00000635008 178 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP17L3A6NCW0 AP000432.2-201ENST00000624164 2048 ntBASIC5.69□□□□□ -1.5
USP17L3A6NCW0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 MUC2-202ENST00000613187 4845 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 Y_RNA.152-201ENST00000363578 100 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 RNU6-842P-201ENST00000384269 107 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 HSFY6P-201ENST00000445573 403 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 RPL23AP24-201ENST00000458203 385 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC007016.1-201ENST00000512110 244 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC015795.1-201ENST00000513669 327 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 SNORA31.22-201ENST00000517204 135 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 SNORD84-203ENST00000584275 78 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 MIR548AC-201ENST00000585049 88 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 NUTF2P8-201ENST00000604593 363 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 AC018889.1-201ENST00000605372 397 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 RNU6-85P-201ENST00000605989 107 ntBASIC5.68□□□□□ -1.5
USP17L3A6NCW0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP17L3A6NCW0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms