Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AC023050.2-201ENST00000544968 387 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AC128657.1-201ENST00000549459 145 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL845331.3-202ENST00000562856 261 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 VN1R82P-201ENST00000601481 356 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL596327.1-201ENST00000603629 213 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL031176.1-201ENST00000604554 466 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL590099.1-201ENST00000615276 138 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AC079228.1-201ENST00000624774 1049 ntBASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMIM28A0A1B0GU29 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 RNU1-100P-201ENST00000365255 165 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 XGY1-201ENST00000381172 446 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AL136372.1-201ENST00000403060 228 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 OR2B8P-201ENST00000432841 938 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC112673.1-201ENST00000513168 575 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 MTCYBP43-201ENST00000513621 740 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 SNORA31.8-201ENST00000516327 108 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 RNU6-528P-201ENST00000516926 100 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 EEF1A1P37-201ENST00000522748 715 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC090615.1-201ENST00000577519 154 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AL353997.4-201ENST00000586196 166 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC025588.2-201ENST00000604851 466 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC106900.2-201ENST00000604994 317 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC012443.1-201ENST00000605605 231 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC013244.3-201ENST00000605614 388 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC002076.2-201ENST00000617362 122 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC009812.4-201ENST00000569134 1805 ntBASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMIM28A0A1B0GU29 AC087359.1-201ENST00000508335 1740 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 RNU6-931P-201ENST00000363850 107 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 MIR518C-201ENST00000384822 101 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AL445529.1-201ENST00000398713 389 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 RNU2-43P-201ENST00000410306 190 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 MTCO2P21-201ENST00000419780 677 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AL139413.1-201ENST00000421309 217 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 BEND7P1-201ENST00000422058 457 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 XKRYP1-201ENST00000423438 492 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 DPPA2P1-201ENST00000428060 556 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 XKRYP2-201ENST00000432915 492 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 RSU1P2-202ENST00000437884 485 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC004866.2-201ENST00000438285 481 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 MTCYBP34-201ENST00000439552 670 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 MTCO1P27-201ENST00000448269 226 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 ANKRD26P4-201ENST00000455755 950 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AP002884.2-201ENST00000471647 395 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 RPL23AP11-201ENST00000475260 469 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC109464.2-201ENST00000510242 943 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC109329.2-201ENST00000519658 482 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC022690.1-201ENST00000526681 550 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AP001646.1-201ENST00000527936 915 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AP003497.1-201ENST00000528472 562 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AL354943.1-201ENST00000572103 781 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 COX6CP3-201ENST00000580869 223 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AL133393.1-201ENST00000603277 287 ntBASIC2.73□□□□□ -1.97
SMIM28A0A1B0GU29 AC008962.1-201ENST00000605729 304 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms