Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC087894.1-201ENST00000538359 518 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC008277.2-201ENST00000605196 797 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 Y_RNA.234-201ENST00000364409 97 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-637P-201ENST00000384050 107 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 MIR128-1-201ENST00000384921 82 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA48.2-201ENST00000390926 124 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 MTCO1P56-201ENST00000401674 224 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 TPMTP2-201ENST00000414372 726 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC007435.1-201ENST00000421086 415 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AL135938.1-201ENST00000443141 297 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 CACYBPP2-201ENST00000453625 678 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 FAM172BP-201ENST00000487497 1089 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC080014.1-201ENST00000496877 1201 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AP003355.1-201ENST00000518956 587 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 BTF3P12-201ENST00000519620 469 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC090136.1-201ENST00000520009 240 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 HMGB1P41-201ENST00000520234 440 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC123904.3-201ENST00000547218 814 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC087897.1-201ENST00000550134 156 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 HMGN2P15-201ENST00000585707 270 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AC004987.4-201ENST00000603383 338 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AL160237.3-201ENST00000604114 1013 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 AL603758.1-201ENST00000618654 241 ntBASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RHBDD3Q9Y3P4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RHBDD3Q9Y3P4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC009902.3-201ENST00000606235 2172 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-1078P-201ENST00000364522 103 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-140P-201ENST00000384566 108 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 MIR491-201ENST00000384877 84 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL109755.1-201ENST00000401791 649 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU2-42P-201ENST00000410697 113 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC096649.2-201ENST00000416186 393 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL139421.1-201ENST00000423010 169 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC087499.2-201ENST00000432861 149 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 OSTCP8-201ENST00000445117 448 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC017099.1-201ENST00000448261 1028 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RPL36AP51-201ENST00000487216 318 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 HMGB1P28-201ENST00000507778 552 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-1225P-201ENST00000516336 65 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 HMGN1P28-201ENST00000521340 364 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3912-201ENST00000577566 105 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL451007.1-201ENST00000595491 289 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL049779.4-201ENST00000604500 156 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 FTX_3.1-201ENST00000610451 147 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC025594.3-201ENST00000613068 790 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AC018926.1-201ENST00000616335 435 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AL445264.1-201ENST00000621719 171 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AP003485.1-201ENST00000625093 753 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 MTND1P37-201ENST00000636562 264 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 AP005901.5-201ENST00000545779 1796 ntBASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RHBDD3Q9Y3P4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AL079343.1-201ENST00000572358 1771 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 GNG5P1-201ENST00000255500 204 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 SNORA38-201ENST00000363946 132 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms