Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 SAMMSON-226ENST00000642089 1582 ntBASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 AL591135.1-201ENST00000401578 5914 ntBASIC6.31□□□□□ -1.4
HPS5Q9UPZ3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 IQCB2P-201ENST00000401788 1633 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RPS23P10-201ENST00000416185 486 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RPL12P17-201ENST00000432393 498 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 GSTM5P1-201ENST00000434751 660 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RPL21P41-201ENST00000459863 264 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC092754.1-201ENST00000472975 479 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RN7SL356P-201ENST00000582228 248 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AC006329.2-201ENST00000611491 394 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 uc_338.7-201ENST00000621834 124 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AL031601.2-202ENST00000622650 282 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 AL034549.2-201ENST00000618285 3373 ntBASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HPS5Q9UPZ3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 Y_RNA.358-201ENST00000365491 99 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC119751.6-201ENST00000416712 186 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC097462.2-201ENST00000504623 481 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RNY3P16-201ENST00000516338 101 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RNU6-677P-201ENST00000516914 101 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RNA5SP373-201ENST00000517271 95 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 FKBP1BP1-201ENST00000553366 325 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC023824.2-201ENST00000566185 400 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 AC074101.1-201ENST00000637861 241 ntBASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HPS5Q9UPZ3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 RPL21P90-201ENST00000415692 466 ntBASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 Z95327.1-201ENST00000446082 482 ntBASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 AC006511.1-201ENST00000470614 315 ntBASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 AC010631.1-201ENST00000474150 156 ntBASIC6.28□□□□□ -1.4
HPS5Q9UPZ3 RPL23AP65-201ENST00000475608 468 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms