Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AP001025.2-201ENST00000490908 477 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 RAC1P5-201ENST00000512182 576 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 RNA5SP356-201ENST00000515972 94 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 OR5G4P-201ENST00000525251 760 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC124947.2-202ENST00000552735 133 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 NBEAP1-201ENST00000554452 979 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 BNIP3P39-201ENST00000601077 554 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AL357094.1-201ENST00000603845 844 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC068313.1-201ENST00000604028 1008 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC013470.4-201ENST00000619978 986 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC079597.1-201ENST00000624306 508 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 DDX43P2-201ENST00000604753 1354 ntBASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
NPIPA1Q9UND3 AC010680.1-201ENST00000590024 3590 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC093831.2-201ENST00000624393 3427 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC073325.2-201ENST00000339545 159 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 RNU1-39P-201ENST00000383897 165 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 RNU6-198P-201ENST00000384258 104 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SNORA26.7-201ENST00000391288 122 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 RNU6-516P-201ENST00000411381 104 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SPA17P1-201ENST00000416656 452 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC093151.1-201ENST00000427711 313 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC093156.1-201ENST00000440382 670 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 RPL23AP58-201ENST00000440453 469 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 MTCYBP43-201ENST00000513621 740 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC034159.1-201ENST00000513885 583 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AL133271.1-201ENST00000538229 291 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SETP2-201ENST00000553886 926 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC005951.2-201ENST00000576282 495 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 DUXAP4-201ENST00000603046 613 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC097478.2-201ENST00000610572 514 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AL133445.2-201ENST00000611191 527 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC007318.2-201ENST00000620999 243 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC019226.1-201ENST00000625666 515 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC099063.3-201ENST00000642066 185 ntBASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPA1Q9UND3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RNU6-270P-201ENST00000364131 105 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RNU6-853P-201ENST00000364306 107 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 SNORA23-201ENST00000365128 182 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 SAR1AP4-201ENST00000429225 591 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 AL117351.1-201ENST00000438864 766 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RPS24P13-201ENST00000442520 397 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 DDX3P2-201ENST00000446138 111 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 USP9YP10-201ENST00000454868 628 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 RNU6-420P-201ENST00000458780 107 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 AL135752.1-201ENST00000479477 471 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 LARP1BP2-201ENST00000486594 519 ntBASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPA1Q9UND3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms