Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNA5SP479-201ENST00000364858 117 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-882P-201ENST00000391025 103 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 CISD1P1-201ENST00000393907 327 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RNA5SP111-201ENST00000411386 101 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RPL7AP73-201ENST00000413490 353 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RPL36AP10-201ENST00000421785 322 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RPL7P37-201ENST00000425095 738 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RSL24D1P6-201ENST00000426934 401 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL121871.1-201ENST00000443413 436 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC008264.1-201ENST00000447612 367 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SL443P-201ENST00000464331 290 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC087884.1-201ENST00000469738 328 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL135752.1-201ENST00000479477 471 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 TBCAP3-201ENST00000512475 312 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1137P-201ENST00000517073 99 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 RNU4-60P-201ENST00000517239 135 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL355836.1-201ENST00000555951 870 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 MIR4277-201ENST00000578298 84 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC010680.4-201ENST00000605334 543 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AL158032.1-201ENST00000605401 106 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 SDR42E1P2-201ENST00000614861 481 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC091925.1-201ENST00000623204 462 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 AC139769.1-204ENST00000472297 1931 ntBASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CDC42EP3Q9UKI2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC025031.4-201ENST00000621248 3271 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-76P-201ENST00000384060 104 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-356P-201ENST00000384140 107 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC021146.3-201ENST00000511911 260 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP122-201ENST00000515923 296 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-1213P-201ENST00000517075 94 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 RN7SKP295-201ENST00000517264 153 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC100830.2-201ENST00000581636 240 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 Z98200.1-201ENST00000607298 470 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC131238.1-201ENST00000617135 328 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LINC00901.1-201ENST00000617252 152 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 7SK.10-201ENST00000621414 298 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 MIR6830-201ENST00000636015 70 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 MTND5P1-201ENST00000445440 1375 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 AC010733.2-201ENST00000589496 5702 ntBASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.11□□□□□ -1.75
CDC42EP3Q9UKI2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AC074029.4-201ENST00000624796 1859 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RNU6-371P-201ENST00000364283 108 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RNA5SP223-201ENST00000365174 120 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 SNORA75B-201ENST00000384053 137 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AL356057.3-201ENST00000402607 340 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 AL590704.1-201ENST00000402856 794 ntBASIC4.1□□□□□ -1.75
CDC42EP3Q9UKI2 RNU4-25P-201ENST00000410569 230 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms