Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP003034.1-201ENST00000534621 422 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 FAM60BP-201ENST00000578364 658 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC012507.3-201ENST00000603556 477 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 RBM11P1-201ENST00000604951 799 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 AF250324.2-201ENST00000608299 610 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC090517.2-201ENST00000614966 680 ntBASIC4.1□□□□□ -1.75
COL20A1Q9P218 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL20A1Q9P218 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL20A1Q9P218 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL20A1Q9P218 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
COL20A1Q9P218 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL20A1Q9P218 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL20A1Q9P218 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 Y_RNA.9-201ENST00000362354 101 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 RNU6-1284P-201ENST00000363701 100 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 PPP1R11P2-201ENST00000423543 382 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 DUTP6-201ENST00000425573 462 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 USP9YP18-201ENST00000425912 695 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 UBE2V1P8-201ENST00000437166 265 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 MTCO3P45-201ENST00000443036 613 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 SNORD97-201ENST00000459187 142 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC008481.1-201ENST00000463278 396 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AP000873.1-201ENST00000463987 400 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 RPS3AP14-201ENST00000483907 780 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 HMGB1P22-201ENST00000505315 124 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 RNU7-51P-201ENST00000516560 62 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC103710.2-201ENST00000609912 942 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 SNHG22-203ENST00000617833 660 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 U4.6-201ENST00000621618 127 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AL360181.4-201ENST00000621752 134 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC009161.2-201ENST00000624626 138 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 AL136313.1-201ENST00000624804 202 ntBASIC4.09□□□□□ -1.75
COL20A1Q9P218 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.09□□□□□ -1.75
COL20A1Q9P218 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL20A1Q9P218 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 OR5J1P-201ENST00000313544 939 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 SNORA23-201ENST00000365128 182 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 MIR34B-201ENST00000385076 84 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 RPL23AP48-201ENST00000406913 488 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC097713.2-201ENST00000430199 356 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 CR848007.1-201ENST00000442354 1699 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 MTATP6P30-201ENST00000443540 664 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 snoU13.4-201ENST00000458916 104 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC025518.1-201ENST00000479856 347 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 HSPD1P15-201ENST00000505573 1122 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC004062.1-201ENST00000509926 645 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC005921.1-201ENST00000510589 286 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC074250.1-201ENST00000511117 192 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 FAM60DP-201ENST00000524174 632 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC123904.3-201ENST00000547218 814 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AF038458.1-201ENST00000588406 262 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC006116.10-201ENST00000591836 581 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL139286.1-201ENST00000604465 483 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL161756.2-201ENST00000604597 246 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC006077.1-201ENST00000604746 343 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC012443.1-201ENST00000605605 231 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC004067.1-201ENST00000608733 700 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC017083.3-201ENST00000609955 700 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 AL157786.1-207ENST00000627771 695 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 AC138649.5-201ENST00000637456 137 ntBASIC4.08□□□□□ -1.76
COL20A1Q9P218 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL20A1Q9P218 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL20A1Q9P218 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms