Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 OR4K11P-201ENST00000431829 904 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 WASF1P1-201ENST00000447560 1131 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AL136097.1-201ENST00000456945 913 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RBM43P1-201ENST00000476891 1081 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS3AP14-201ENST00000483907 780 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RAC1P2-201ENST00000511164 579 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU2-58P-201ENST00000516403 183 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-201P-201ENST00000517100 61 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AK6P1-201ENST00000540219 478 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AL158211.4-201ENST00000606988 584 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AL592295.2-201ENST00000612578 206 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC009159.1-201ENST00000618386 642 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC015967.1-201ENST00000619893 476 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AL359880.1-201ENST00000621879 266 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC011460.1-201ENST00000636268 1834 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC066616.2-201ENST00000559334 1481 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORA51.2-201ENST00000364595 132 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU4-12P-201ENST00000365233 139 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR135A2-201ENST00000384854 100 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 MTCO3P40-201ENST00000392516 676 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 CIR1P3-201ENST00000405137 479 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS29P4-201ENST00000414733 161 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL353777.1-201ENST00000425552 326 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL21P66-201ENST00000426566 466 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL31P35-201ENST00000431058 377 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC091286.1-201ENST00000431233 461 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 PSPHP1-201ENST00000450062 261 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS24P6-201ENST00000452670 400 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 MTND1P9-201ENST00000453775 944 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC099563.1-201ENST00000456086 418 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL7P47-201ENST00000497299 556 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL23AP55-201ENST00000498163 452 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC019235.1-201ENST00000503847 207 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC114967.1-201ENST00000504890 259 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 ARL4AP2-201ENST00000507378 601 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 IGKV2-23-201ENST00000518729 323 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL391840.1-201ENST00000571144 367 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR3186-201ENST00000577404 85 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL359999.1-201ENST00000604513 294 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC004067.1-201ENST00000608733 700 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL590282.1-201ENST00000610379 1136 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AC009268.2-201ENST00000621925 457 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AL645937.1-201ENST00000641739 1652 ntBASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NCKIPSDQ9NZQ3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU4-1-201ENST00000363925 141 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.303-201ENST00000364998 94 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 CCNG1P1-201ENST00000406783 885 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 SSXP9-201ENST00000417503 292 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 ZNF863P-201ENST00000426746 417 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 MTCO2P19-201ENST00000427513 598 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC079780.1-201ENST00000428259 207 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC104850.1-201ENST00000435940 476 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORA71B-202ENST00000439232 272 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC004801.2-202ENST00000463559 283 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 HMGB1P22-201ENST00000505315 124 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms