Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
LIMD2Q9BT23 AC069528.2-201ENST00000624849 1991 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 ANKRD36P1-201ENST00000344424 659 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 RNU6-40P-201ENST00000384254 107 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL024474.1-201ENST00000404655 591 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 SUMO2P12-201ENST00000405924 140 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 SNORA11.4-201ENST00000408823 129 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC005005.2-201ENST00000420779 380 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC024082.2-201ENST00000434771 238 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 RAC1P7-201ENST00000445367 377 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC055731.1-201ENST00000474387 401 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC105252.1-201ENST00000503089 286 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC017037.2-201ENST00000513850 890 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 ARL2BPP5-201ENST00000523141 481 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 SNRPGP18-201ENST00000553000 214 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC040174.2-201ENST00000602701 465 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL109918.3-201ENST00000603072 338 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC021749.1-201ENST00000604322 607 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 BNIP3P4-201ENST00000604946 565 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL450336.1-201ENST00000605180 586 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL627230.6-201ENST00000611129 280 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC013562.2-201ENST00000611632 603 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AC109809.1-201ENST00000619665 545 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 CCT4P2-201ENST00000233836 1548 ntBASIC1.28□□□□□ -2.2
LIMD2Q9BT23 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.28□□□□□ -2.2
LIMD2Q9BT23 AL049641.1-201ENST00000441055 1948 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 GDI2P1-201ENST00000429312 1336 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RNU6-220P-201ENST00000390919 107 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AL356057.1-202ENST00000402263 756 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 BTF3P7-201ENST00000407097 488 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RNU6-77P-201ENST00000410554 91 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RNU6-1328P-201ENST00000410938 106 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC092047.1-201ENST00000424997 240 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 HMGN2P19-201ENST00000425149 265 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC093422.3-201ENST00000428506 305 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AL356867.1-201ENST00000429623 299 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AL592447.1-201ENST00000447592 540 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AL136380.1-201ENST00000447970 162 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 KLF3P2-201ENST00000465138 268 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RPL23AP42-201ENST00000471152 471 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 OR9N1P-202ENST00000494289 481 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC104090.1-201ENST00000506341 1171 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC096571.1-202ENST00000506634 735 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC093281.2-201ENST00000510153 597 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RNU5F-8P-201ENST00000515941 111 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RNA5SP281-201ENST00000516504 135 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC087276.1-201ENST00000529659 480 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC011611.5-201ENST00000552477 578 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC073308.1-201ENST00000623696 305 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AP003400.5-201ENST00000624827 617 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 OR5H6-203ENST00000642105 978 ntBASIC1.27□□□□□ -2.21
LIMD2Q9BT23 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
LIMD2Q9BT23 AC080128.1-201ENST00000474389 1917 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms