Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC092326.2-201ENST00000624772 1561 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 SNORA23-201ENST00000365128 182 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 Y_RNA.372-201ENST00000365599 102 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 Y_RNA.409-201ENST00000383990 98 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 MIR23A-201ENST00000385245 73 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 SNORD17-201ENST00000390930 237 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 TXNP7-201ENST00000406296 293 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 RPL23AP83-201ENST00000434984 473 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 UBE2V1P8-201ENST00000437166 265 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC005094.1-201ENST00000440420 368 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 snoU13.4-201ENST00000458916 104 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC105914.1-201ENST00000511798 226 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC010342.1-201ENST00000514047 877 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 RNU6-410P-201ENST00000517006 107 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC015813.4-201ENST00000610469 179 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL442067.2-201ENST00000614033 363 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AL353748.2-201ENST00000622148 471 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC091953.5-201ENST00000622919 233 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 AC138649.5-201ENST00000637456 137 ntBASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
PAAF1Q9BRP4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 TAB3P1-202ENST00000452645 1634 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL049781.1-201ENST00000623195 3585 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1097P-201ENST00000363586 107 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 SNORA7.2-201ENST00000364446 145 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RNA5SP267-201ENST00000364893 126 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 CALM2P3-201ENST00000400429 449 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 MTCO1P39-201ENST00000426148 480 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RPL21P66-201ENST00000426566 466 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RPL23AP30-201ENST00000432419 501 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RPS6P12-201ENST00000432491 726 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 MTCO3P45-201ENST00000443036 613 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 MTATP6P30-201ENST00000443540 664 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC079781.2-201ENST00000446424 169 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 BX510359.1-201ENST00000456973 237 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC022364.2-201ENST00000457963 554 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 GMPSP1-201ENST00000514075 579 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 OR4R1P-201ENST00000529879 463 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
PAAF1Q9BRP4 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms