Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VRK1Q99986 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK1Q99986 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VRK1Q99986 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 Y_RNA.263-201ENST00000364659 114 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 MIR514A1-201ENST00000385133 98 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 RNA5SP397-201ENST00000391323 118 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 UBE2V1P2-201ENST00000397758 440 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 RNA5SP104-201ENST00000410989 118 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 Z74021.1-201ENST00000423610 407 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AL645608.4-201ENST00000423619 154 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 RPS12P10-201ENST00000427031 377 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 MTND3P23-201ENST00000431980 347 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 KCTD9P3-201ENST00000434597 1169 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 TXNP1-201ENST00000441872 371 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.97□□□□□ -1.77
VRK1Q99986 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK1Q99986 AL359273.1-201ENST00000510918 627 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC093840.1-201ENST00000511599 336 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK1Q99986 RNU6-1073P-201ENST00000517182 106 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC090151.1-201ENST00000520784 730 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK1Q99986 PSMA3P-201ENST00000555485 635 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 MIR4697-201ENST00000582977 78 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 MIR5096-201ENST00000583713 70 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.97□□□□□ -1.77
VRK1Q99986 AL117336.2-201ENST00000602435 335 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 C8orf59P2-201ENST00000603441 271 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AP001330.4-201ENST00000604350 154 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC069234.5-201ENST00000611056 416 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AL390240.1-201ENST00000612950 384 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AL731566.2-201ENST00000618971 317 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AP005019.3-201ENST00000620418 560 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 AC090617.10-201ENST00000624308 134 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 MFSD8-216ENST00000641147 4009 ntBASIC3.97□□□□□ -1.77
VRK1Q99986 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.97□□□□□ -1.77
VRK1Q99986 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VRK1Q99986 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK1Q99986 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
VRK1Q99986 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.96□□□□□ -1.78
VRK1Q99986 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VRK1Q99986 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 Y_RNA.100-201ENST00000363141 102 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 SNORA51.2-201ENST00000364595 132 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RNA5SP189-201ENST00000364920 115 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RNU6-190P-201ENST00000384154 102 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 MT-TD-201ENST00000387419 68 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RNU6-510P-201ENST00000391239 108 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 MIR1290-201ENST00000408735 78 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RNU4-26P-201ENST00000410270 107 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 EEF1A1P40-201ENST00000412883 573 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK1Q99986 RPL23AP1-201ENST00000428990 471 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 FABP5P13-201ENST00000452144 328 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AC087588.1-201ENST00000462203 316 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 AC025164.1-201ENST00000496249 478 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RNU6-123P-201ENST00000516163 102 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 Y_RNA.689-201ENST00000516589 107 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 RAB11AP2-201ENST00000545905 639 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK1Q99986 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK1Q99986 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK1Q99986 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.96□□□□□ -1.78
VRK1Q99986 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK1Q99986 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 DPPA3P3-201ENST00000603842 430 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AL138889.2-201ENST00000603883 242 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AC013553.2-201ENST00000604244 589 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 AC034102.8-201ENST00000615146 484 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AL359314.1-201ENST00000616913 261 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 AL136221.1-201ENST00000621449 509 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK1Q99986 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 USP8P1-201ENST00000494673 3183 ntBASIC3.96□□□□□ -1.78
VRK1Q99986 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK1Q99986 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms