Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC021451.1-201ENST00000523498 1129 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 MTCO1P47-201ENST00000523889 1271 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 DEFB131D-201ENST00000526803 184 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
NPAS2Q99743 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.72□□□□□ -1.97
NPAS2Q99743 CYCSP39-201ENST00000565821 309 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AL512347.1-201ENST00000566420 503 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS2Q99743 RPL23AP84-201ENST00000571193 464 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 OR4K7P-201ENST00000580232 945 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 MIR4513-201ENST00000581077 86 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC091057.3-201ENST00000602684 733 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS2Q99743 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 MIR7106-201ENST00000612419 65 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC079597.1-201ENST00000624306 508 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS2Q99743 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
NPAS2Q99743 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.97
NPAS2Q99743 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPAS2Q99743 OR5J1P-201ENST00000313544 939 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 RNU6-1078P-201ENST00000364522 103 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 RNU6-621P-201ENST00000364752 109 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS2Q99743 RNU6-413P-201ENST00000384115 107 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 AC008850.1-201ENST00000427546 362 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 OR4K11P-201ENST00000431829 904 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.71□□□□□ -1.98
NPAS2Q99743 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.71□□□□□ -1.98
NPAS2Q99743 MTND4LP3-201ENST00000468320 276 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.71□□□□□ -1.98
NPAS2Q99743 HIGD1AP13-201ENST00000509878 289 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 AC091826.1-201ENST00000514065 313 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS2Q99743 RN7SKP132-201ENST00000516001 208 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.71□□□□□ -1.98
NPAS2Q99743 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS2Q99743 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.71□□□□□ -1.98
NPAS2Q99743 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS2Q99743 AC011458.1-201ENST00000604034 617 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 AC013476.2-201ENST00000614456 459 ntBASIC2.71□□□□□ -1.98
NPAS2Q99743 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS2Q99743 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
NPAS2Q99743 AC011477.1-204ENST00000623416 1325 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS2Q99743 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS2Q99743 NACA3P-201ENST00000359690 648 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 RNU6-97P-201ENST00000363387 104 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 RNU6-741P-201ENST00000383889 107 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 RNU6-637P-201ENST00000384050 107 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 Y_RNA.472-201ENST00000384322 102 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 MIR325-201ENST00000385260 98 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS2Q99743 SETP8-201ENST00000435341 628 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS2Q99743 MTCO1P53-201ENST00000441633 699 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS2Q99743 AC007327.1-201ENST00000447461 264 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS2Q99743 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS2Q99743 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS2Q99743 AC087588.1-201ENST00000462203 316 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AC104563.1-201ENST00000476147 376 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS2Q99743 AC083906.5-201ENST00000503722 328 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 SCGB1D5P-201ENST00000515134 247 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AP002748.2-201ENST00000528671 348 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 HPRT1P3-201ENST00000539521 576 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS2Q99743 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS2Q99743 CYCSP2-201ENST00000558168 301 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS2Q99743 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS2Q99743 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 AL603758.1-201ENST00000618654 241 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 DDX43P2-201ENST00000604753 1354 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPAS2Q99743 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.7□□□□□ -1.98
NPAS2Q99743 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NPAS2Q99743 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS2Q99743 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC092447.7-201ENST00000422212 1621 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NPAS2Q99743 SNORD116-12-201ENST00000384468 92 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS2Q99743 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS2Q99743 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS2Q99743 Z82210.1-201ENST00000440037 231 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 BNIP3P2-201ENST00000441221 577 ntBASIC2.69□□□□□ -1.98
NPAS2Q99743 MTND5P14-201ENST00000441481 1267 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms