Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC069499.1-201ENST00000489433 509 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 RPL31P61-201ENST00000496160 376 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC116562.3-201ENST00000506136 177 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC068587.5-201ENST00000528506 175 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AL359212.1-201ENST00000556608 614 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 NCAPGP2-201ENST00000557911 754 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 HMGB1P33-201ENST00000563485 527 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.62□□□□□ -1.83
NPAS1Q99742 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AP001029.3-201ENST00000588063 596 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC091167.4-201ENST00000605079 184 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AL121992.2-201ENST00000606262 256 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AC004696.1-201ENST00000614345 607 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NPAS1Q99742 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS1Q99742 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS1Q99742 SNORA60-201ENST00000362396 134 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 Y_RNA.402-201ENST00000383972 102 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 Y_RNA.573-201ENST00000384763 105 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NPAS1Q99742 RNU6-780P-201ENST00000391030 104 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC068050.1-201ENST00000394891 380 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 USP9YP27-201ENST00000418455 438 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 SDCBPP3-201ENST00000419629 891 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS1Q99742 HMGB1P27-201ENST00000431429 603 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AL596276.1-201ENST00000434465 418 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.61□□□□□ -1.83
NPAS1Q99742 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AL121769.1-201ENST00000469473 401 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 VN1R17P-201ENST00000472048 1090 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS1Q99742 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.61□□□□□ -1.83
NPAS1Q99742 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS1Q99742 RNU6-352P-201ENST00000516908 107 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 RNA5SP179-201ENST00000517284 121 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.61□□□□□ -1.83
NPAS1Q99742 YPEL5P3-201ENST00000547227 352 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC025678.1-201ENST00000567861 338 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 HMGB1P6-201ENST00000569046 646 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 MIR3160-1-201ENST00000577972 85 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS1Q99742 AC002545.1-201ENST00000592511 181 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC104662.1-201ENST00000604448 511 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC106900.2-201ENST00000604994 317 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC017083.3-201ENST00000609955 700 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 AC068944.2-201ENST00000610373 403 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 MIR6875-201ENST00000617506 72 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 MIR6500-201ENST00000622700 86 ntBASIC3.61□□□□□ -1.83
NPAS1Q99742 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPAS1Q99742 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.61□□□□□ -1.83
NPAS1Q99742 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS1Q99742 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPAS1Q99742 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPAS1Q99742 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.6□□□□□ -1.83
NPAS1Q99742 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NPAS1Q99742 ZNF680P1-201ENST00000436625 1469 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
NPAS1Q99742 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
NPAS1Q99742 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NPAS1Q99742 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS1Q99742 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPAS1Q99742 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.6□□□□□ -1.83
NPAS1Q99742 RNU6-179P-201ENST00000363350 107 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 RNU6-960P-201ENST00000364056 120 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 Y_RNA.450-201ENST00000384198 113 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 SNORA36C-201ENST00000384289 132 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 AL591416.1-201ENST00000404015 867 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 RN7SKP140-201ENST00000411196 284 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 MTND1P23-201ENST00000416931 372 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.6□□□□□ -1.83
NPAS1Q99742 AL356867.1-201ENST00000429623 299 ntBASIC3.6□□□□□ -1.83
NPAS1Q99742 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms