Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CALR3Q96L12 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CALR3Q96L12 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CALR3Q96L12 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.54□□□□□ -1.52
CALR3Q96L12 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.54□□□□□ -1.52
CALR3Q96L12 NCAPGP1-201ENST00000505112 1814 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CALR3Q96L12 Y_RNA.39-201ENST00000362620 98 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RNU6-384P-201ENST00000364900 104 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RNU6-741P-201ENST00000383889 107 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RNU6-1279P-201ENST00000383917 103 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 Y_RNA.389-201ENST00000383924 113 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 RNA5SP178-201ENST00000410380 128 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 AL592148.1-201ENST00000413568 445 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 MRPS18CP6-201ENST00000423587 223 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 COX6CP13-201ENST00000428703 226 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 EEF1B2P6-201ENST00000445713 673 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.54□□□□□ -1.52
CALR3Q96L12 RNU6-1037P-201ENST00000459571 107 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RN7SL51P-201ENST00000468230 285 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 RPL21P13-201ENST00000488305 481 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 RNA5SP464-201ENST00000516251 108 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 SNORA70.16-201ENST00000516390 95 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 HMGB1P40-201ENST00000525121 540 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 AP002404.1-201ENST00000532005 451 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 MIR4273-201ENST00000582824 84 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 AC244100.4-201ENST00000617747 388 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 U4.1-201ENST00000620349 87 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.54□□□□□ -1.52
CALR3Q96L12 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.54□□□□□ -1.52
CALR3Q96L12 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CALR3Q96L12 AC112198.2-201ENST00000426589 6996 ntBASIC5.54□□□□□ -1.52
CALR3Q96L12 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CALR3Q96L12 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CALR3Q96L12 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CALR3Q96L12 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CALR3Q96L12 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 HMGB1P12-201ENST00000438594 598 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 BTF3P6-201ENST00000448054 499 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 RN7SL168P-201ENST00000463821 279 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 RN7SL441P-201ENST00000492388 296 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 RNU6-1073P-201ENST00000517182 106 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 AC107958.1-201ENST00000556576 290 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 CPDP1-201ENST00000579660 283 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 MIR4505-201ENST00000582238 73 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 AC018889.1-201ENST00000605372 397 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 AL121917.1-203ENST00000605534 577 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 AL606534.2-204ENST00000635008 178 ntBASIC5.53□□□□□ -1.52
CALR3Q96L12 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CALR3Q96L12 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CALR3Q96L12 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CALR3Q96L12 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CALR3Q96L12 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CALR3Q96L12 AC009643.2-201ENST00000603543 1448 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-37P-201ENST00000362692 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-11P-201ENST00000364234 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-7-201ENST00000364784 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-8-201ENST00000365467 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-25P-201ENST00000383873 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-1-201ENST00000383898 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-48P-201ENST00000384161 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-36P-201ENST00000384172 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-4P-201ENST00000384205 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-5P-201ENST00000384238 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-3P-201ENST00000384314 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 SNORA16A-201ENST00000384342 137 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-16P-201ENST00000384385 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-15P-201ENST00000384534 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-2-201ENST00000384627 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-29P-201ENST00000384637 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-9-201ENST00000384776 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-33P-201ENST00000384793 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 AL022722.2-201ENST00000402519 180 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 AL513475.1-201ENST00000406602 315 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.52□□□□□ -1.53
CALR3Q96L12 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.52□□□□□ -1.53
CALR3Q96L12 YWHAEP1-201ENST00000453697 763 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.52□□□□□ -1.53
CALR3Q96L12 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.52□□□□□ -1.53
CALR3Q96L12 Vault.1-201ENST00000516474 102 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU4-77P-201ENST00000516692 156 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms