Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 Y_RNA.695-201ENST00000516715 107 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC022878.1-201ENST00000530684 149 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC013553.2-201ENST00000604244 589 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC009570.1-201ENST00000609599 745 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 SDR42E1P2-201ENST00000614861 481 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC068831.7-201ENST00000616954 363 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC009878.1-201ENST00000621819 340 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AP003122.6-201ENST00000623831 495 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC136Q96JN2 AC090740.1-201ENST00000623193 2262 ntBASIC4.42□□□□□ -1.7
CCDC136Q96JN2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 RNY3P13-201ENST00000365542 102 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 SNORD116-1-201ENST00000384335 95 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AL022238.1-201ENST00000442557 355 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 MTATP6P30-201ENST00000443540 664 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 GAPDHP27-201ENST00000447427 1020 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC108059.3-201ENST00000456388 214 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 RN7SL132P-201ENST00000478131 296 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 MTND5P13-201ENST00000513046 1079 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 CASP1P1-201ENST00000526345 212 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AC009977.1-201ENST00000586015 570 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AL020997.2-201ENST00000602607 184 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 AP000860.1-201ENST00000605250 559 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 U4.6-201ENST00000621618 127 ntBASIC4.41□□□□□ -1.7
CCDC136Q96JN2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC136Q96JN2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CCDC136Q96JN2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC136Q96JN2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC136Q96JN2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 FGF7P2-201ENST00000332473 296 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 MIR148B-201ENST00000362252 99 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 SNORD56.3-201ENST00000363507 71 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 RNU6-278P-201ENST00000390945 109 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 Y_RNA.598-201ENST00000410480 95 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 DBIP2-201ENST00000419076 262 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC091390.3-201ENST00000426478 338 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC098826.1-201ENST00000433943 471 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 SSXP1-201ENST00000453640 473 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 MTND4LP22-201ENST00000508209 276 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 SCARNA15.2-201ENST00000516409 127 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 KC877982.1-201ENST00000602313 470 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AL606834.2-201ENST00000602954 668 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AL358072.1-201ENST00000604156 575 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AL359999.1-201ENST00000604513 294 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC019176.2-201ENST00000611579 315 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC025594.3-201ENST00000613068 790 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AL603839.4-201ENST00000624658 1005 ntBASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC136Q96JN2 AC092104.1-201ENST00000497346 1441 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AL354719.1-201ENST00000406535 843 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 MIR1290-201ENST00000408735 78 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 RN7SKP140-201ENST00000411196 284 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 HMGN1P14-201ENST00000412459 517 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 ELOCP17-201ENST00000414751 326 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 SPA17P1-201ENST00000416656 452 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms