Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC016691.1-201ENST00000441321 413 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC008837.2-201ENST00000513076 418 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.15□□□□□ -2.23
SPG11Q96JI7 CBX3P2-202ENST00000583365 535 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 AL590099.1-201ENST00000615276 138 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 SNHG22-203ENST00000617833 660 ntBASIC1.15□□□□□ -2.23
SPG11Q96JI7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 MIR144-201ENST00000384886 86 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 Z85994.2-201ENST00000434327 452 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL161713.1-201ENST00000555538 145 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 AC006270.2-201ENST00000578523 652 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL356118.1-201ENST00000635272 1078 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 TATDN1P1-201ENST00000414123 891 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 AC004854.1-201ENST00000440356 349 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 BMI1P1-201ENST00000445879 941 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 AL360221.1-201ENST00000445989 335 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SPG11Q96JI7 AC108059.3-201ENST00000456388 214 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.14□□□□□ -2.23
SPG11Q96JI7 CBX3P8-201ENST00000532412 525 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 AC104307.1-201ENST00000616142 196 ntBASIC1.14□□□□□ -2.23
SPG11Q96JI7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC110491.1-201ENST00000562191 2010 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 SNORD48-201ENST00000364953 64 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC016769.3-201ENST00000396562 315 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AL596276.1-201ENST00000434465 418 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 MTCO2P9-201ENST00000503214 694 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC016877.3-201ENST00000606778 504 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC006338.1-201ENST00000618453 749 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPG11Q96JI7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPG11Q96JI7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SPG11Q96JI7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 HSPE1P11-201ENST00000339579 310 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 SNORA18.2-201ENST00000383865 132 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 MIR1197-201ENST00000408818 88 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 RNU6-603P-201ENST00000411403 107 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 CYCSP48-201ENST00000417124 323 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 TRAV31-201ENST00000502780 342 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC008427.1-201ENST00000503102 655 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.13□□□□□ -2.23
SPG11Q96JI7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.13□□□□□ -2.23
SPG11Q96JI7 AC008669.1-201ENST00000565823 2178 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 HMGB3P31-201ENST00000413333 595 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.12□□□□□ -2.23
SPG11Q96JI7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.12□□□□□ -2.23
SPG11Q96JI7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.12□□□□□ -2.23
SPG11Q96JI7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.12□□□□□ -2.23
SPG11Q96JI7 AC093752.1-206ENST00000511823 336 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 RNU4-60P-201ENST00000517239 135 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 AC116447.1-201ENST00000613153 453 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 XIST_intron.1-201ENST00000619444 68 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 MTND5P9-201ENST00000503854 1755 ntBASIC1.12□□□□□ -2.23
SPG11Q96JI7 MIR330-201ENST00000362196 94 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 MTND1P23-201ENST00000416931 372 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 CFTRP1-201ENST00000456646 183 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 MIR5694-201ENST00000581190 76 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 RPL23AP88-201ENST00000605759 454 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SPG11Q96JI7 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPG11Q96JI7 SGO1P2-201ENST00000429458 1589 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 AL109741.2-201ENST00000455561 343 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.11□□□□□ -2.23
SPG11Q96JI7 AP005435.4-201ENST00000529514 284 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 AC097504.2-201ENST00000608088 454 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 MIR8087-201ENST00000612745 78 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 AP003499.2-201ENST00000624100 483 ntBASIC1.11□□□□□ -2.23
SPG11Q96JI7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPG11Q96JI7 AC090774.1-201ENST00000435925 246 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 OR9N1P-202ENST00000494289 481 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 ACTR3BP3-201ENST00000565577 979 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AL135786.2-201ENST00000608422 615 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms