Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 AC103996.1-201ENST00000555468 102 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 AC023824.2-201ENST00000566185 400 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HLA-CQ95604 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
HLA-CQ95604 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 AC034229.2-201ENST00000566945 2508 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
HLA-CQ95604 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 DOCK11P1-201ENST00000553480 5932 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-CQ95604 RNU5A-1-201ENST00000362698 116 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 Y_RNA.275-201ENST00000364726 110 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 Y_RNA.383-201ENST00000383855 97 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-CQ95604 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-CQ95604 RN7SKP27-201ENST00000410684 333 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 RNU2-61P-201ENST00000411069 191 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-CQ95604 AP000907.1-201ENST00000428428 510 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 EIF4A1P11-201ENST00000451239 222 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 AC034236.1-201ENST00000469891 373 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 HSPE1P6-201ENST00000479457 291 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 DUTP1-201ENST00000493631 470 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 RNU6-62P-201ENST00000516526 102 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 IGLV3-24-201ENST00000517477 197 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 AC022559.1-201ENST00000520905 205 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-CQ95604 MRPS18CP4-201ENST00000535821 231 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-CQ95604 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-CQ95604 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HLA-CQ95604 FAM60BP-201ENST00000578364 658 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-CQ95604 AC011921.3-201ENST00000605540 361 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 TCL6_3.1-201ENST00000619064 137 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 AC087385.3-201ENST00000620477 187 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 MIR6758-201ENST00000620653 63 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-CQ95604 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-CQ95604 HAUS6P2-201ENST00000433254 2404 ntBASIC5.75□□□□□ -1.49
HLA-CQ95604 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-CQ95604 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-CQ95604 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-CQ95604 AC009812.4-201ENST00000569134 1805 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-CQ95604 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-CQ95604 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-CQ95604 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-CQ95604 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-CQ95604 AC005618.1-201ENST00000606901 3148 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-CQ95604 MAPK10-344ENST00000641718 3746 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC126755.2-208ENST00000327792 462 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC138969.1-213ENST00000331436 462 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 RNU6-512P-201ENST00000364438 103 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 SNORA70.2-201ENST00000364506 135 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 Y_RNA.590-201ENST00000410140 107 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 RNU5A-5P-201ENST00000411054 116 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC068287.1-201ENST00000430283 295 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC007395.1-201ENST00000451333 677 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AP001324.2-201ENST00000461163 319 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 RPS26P21-201ENST00000475397 348 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 RNA5SP471-201ENST00000516971 106 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC008694.2-201ENST00000517591 306 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AK6P2-201ENST00000549020 471 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-CQ95604 SNORD84-203ENST00000584275 78 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-CQ95604 AL161798.1-201ENST00000604630 131 ntBASIC5.74□□□□□ -1.49
HLA-CQ95604 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-CQ95604 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-CQ95604 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-CQ95604 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-CQ95604 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms