Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 RBBP8P1-201ENST00000449447 1844 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC025470.1-201ENST00000510053 2032 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 AC005332.5-201ENST00000591222 2919 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 LINC01963-201ENST00000562038 3148 ntBASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC116Q8IYX3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 NCAPGP1-201ENST00000505112 1814 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 SNORA25.1-201ENST00000362326 128 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.82-201ENST00000363000 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.92-201ENST00000363043 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.235-201ENST00000364412 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.306-201ENST00000365015 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.312-201ENST00000365089 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.322-201ENST00000365151 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.418-201ENST00000384029 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.497-201ENST00000384447 98 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.569-201ENST00000384749 103 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 RN7SKP114-201ENST00000410327 279 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AL592148.1-201ENST00000413568 445 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC008065.1-201ENST00000428525 348 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.650-201ENST00000459002 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 RPL37P6-202ENST00000464216 403 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 TOMM22P6-201ENST00000465035 409 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 RNU6-927P-201ENST00000516199 100 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 RNA5SP228-201ENST00000516232 133 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 RNA5SP471-201ENST00000516971 106 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.777-201ENST00000516982 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 HMGB1P14-201ENST00000557424 591 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.771-201ENST00000598668 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.789-201ENST00000622480 102 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC022400.9-201ENST00000623633 273 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 AC018809.2-201ENST00000602436 3823 ntBASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC116Q8IYX3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AC005005.4-201ENST00000623789 16698 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.123-201ENST00000363338 102 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 RNU6-512P-201ENST00000364438 103 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.343-201ENST00000365354 112 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 RNU6-926P-201ENST00000384075 107 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.435-201ENST00000384095 112 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 RNU4-30P-201ENST00000410245 143 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 RNU6-712P-201ENST00000410558 100 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.629-201ENST00000411368 105 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AC005002.2-201ENST00000438228 269 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 KNOP1P3-201ENST00000446933 426 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AC136777.2-201ENST00000522979 358 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AL161629.2-201ENST00000615347 275 ntBASIC5.34□□□□□ -1.55
CCDC116Q8IYX3 AC091895.1-201ENST00000624494 256 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms