Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 SUB1P2-201ENST00000556401 297 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC115621.1-201ENST00000604653 858 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 MIR7851-201ENST00000610611 160 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AL355365.1-201ENST00000616480 294 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC073073.2-201ENST00000609827 2578 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AL049781.1-201ENST00000623195 3585 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 FRG1CP-201ENST00000358464 769 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 Y_RNA.38-201ENST00000362617 102 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-1322P-201ENST00000364309 107 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 SNORA20.2-201ENST00000383922 131 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 HMGN2P8-201ENST00000391458 268 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 PTMAP5-201ENST00000393073 333 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RPS4XP8-201ENST00000402039 771 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RNU2-15P-201ENST00000410692 191 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RNU2-41P-201ENST00000410991 178 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RPS7P15-201ENST00000415804 584 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 MTATP6P18-201ENST00000417994 673 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC092832.1-201ENST00000422934 400 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AL359893.1-201ENST00000447628 1580 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AL353691.1-201ENST00000451332 387 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RN7SKP277-201ENST00000516895 283 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AP000907.2-201ENST00000530827 353 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 MIR3146-201ENST00000580367 79 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 MIR4719-201ENST00000585233 84 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC073544.1-201ENST00000600110 1595 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC004853.1-201ENST00000604902 698 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 OR6R2P-201ENST00000609216 300 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AL356585.4-201ENST00000623078 1229 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AP003355.3-201ENST00000623465 114 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 AC005609.4-201ENST00000625071 447 ntBASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBE3BQ7Z3V4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 Y_RNA.70-201ENST00000362886 110 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU1-33P-201ENST00000364249 162 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNA5SP42-201ENST00000364278 115 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-169P-201ENST00000365336 107 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-108P-201ENST00000365558 107 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-877P-201ENST00000383868 107 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-908P-201ENST00000410160 94 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 ZNF90P2-204ENST00000419323 1075 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC012498.1-201ENST00000424037 437 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 MTND4P25-201ENST00000441039 533 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 CALM1P1-201ENST00000442082 433 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 SNORD121B-201ENST00000458838 81 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RPL36AP51-201ENST00000487216 318 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC026784.1-201ENST00000507986 352 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-1281P-201ENST00000516223 105 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RN7SKP83-201ENST00000516512 178 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-579P-201ENST00000516879 102 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC022616.3-201ENST00000523940 148 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC008489.1-201ENST00000524271 483 ntBASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.41□□□□□ -1.7
UBE3BQ7Z3V4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms