Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC007785.2-201ENST00000598627 1916 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-339P-201ENST00000384310 107 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 HSPE1P8-201ENST00000406997 288 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNA5SP487-201ENST00000410186 122 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-394P-201ENST00000410735 107 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 EI24P1-201ENST00000416584 867 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RPL7L1P9-201ENST00000431298 745 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC004938.1-201ENST00000438468 308 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 HMGB1P25-201ENST00000468402 607 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AL049830.2-201ENST00000480072 201 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-496P-201ENST00000516145 99 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-479P-201ENST00000516348 105 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-914P-201ENST00000516749 109 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 FTH1P11-201ENST00000517577 551 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 IGKV2D-36-201ENST00000518643 226 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 RPL10P14-201ENST00000565265 298 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC120057.2-201ENST00000571520 271 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC022884.2-201ENST00000578535 580 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 MIR548AC-201ENST00000585049 88 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.772-201ENST00000606692 102 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC034102.8-201ENST00000615146 484 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 MIR6130-201ENST00000619419 109 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC018445.2-201ENST00000622987 260 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 THAP12P5-201ENST00000405864 2275 ntBASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.44-201ENST00000362676 108 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.358-201ENST00000365491 99 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.398-201ENST00000383952 99 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AL079342.1-201ENST00000401460 267 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AC092447.6-201ENST00000414578 210 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RPS15AP40-201ENST00000419621 391 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 REREP1Y-201ENST00000422655 198 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AC093655.2-201ENST00000425735 631 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AL591043.1-201ENST00000432461 424 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 REREP2Y-201ENST00000439103 200 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RPS11P1-201ENST00000451072 473 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RPS4XP1-201ENST00000482189 787 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 SNORA31.3-201ENST00000516029 96 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 SNORD116-28-201ENST00000516123 91 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-941P-201ENST00000516346 108 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 snoU109.6-201ENST00000516831 118 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RN7SKP258-201ENST00000517151 304 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 AC109479.2-201ENST00000517842 174 ntBASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.36□□□□□ -1.55
LYSMD3Q7Z3D4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
LYSMD3Q7Z3D4 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms