Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 CYCSP4-201ENST00000429682 331 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL160004.2-201ENST00000432935 350 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL035407.2-201ENST00000454090 378 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC106707.2-201ENST00000484182 374 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC087276.1-201ENST00000529659 480 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL049870.4-201ENST00000555741 486 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 TRAV15-201ENST00000556680 249 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC044913.1-201ENST00000557200 430 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 HMGB3P26-201ENST00000560051 582 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC055876.1-202ENST00000567053 138 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC137800.2-201ENST00000574375 120 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 MIR4716-201ENST00000579628 84 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 Z84480.1-201ENST00000605131 311 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AL732618.1-201ENST00000623251 301 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC244517.12-201ENST00000623581 663 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BHLHA9Q7RTU4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 OR1S2-201ENST00000302592 978 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 RPL21P132-201ENST00000331267 462 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.117-201ENST00000363294 101 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 Y_RNA.574-201ENST00000384766 95 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 LAP3P1-201ENST00000403648 294 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 RNU2-17P-201ENST00000410290 190 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 ELOCP4-201ENST00000420090 333 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 RPS3AP52-201ENST00000435639 297 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 IFNA20P-201ENST00000436840 528 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 HMGB1P12-201ENST00000438594 598 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL049734.2-201ENST00000441066 616 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL359672.1-201ENST00000442302 409 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL592437.1-201ENST00000443781 492 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC099563.1-201ENST00000456086 418 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC091564.1-201ENST00000464563 479 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 RPL23AP71-201ENST00000470966 469 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC105417.1-201ENST00000514691 285 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC009812.2-201ENST00000517657 457 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 HMGB1P23-201ENST00000518743 568 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 PSMA2P1-201ENST00000526365 646 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC053481.3-201ENST00000577881 843 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC009977.1-201ENST00000586015 570 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AC243654.2-201ENST00000612843 443 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AL359757.2-201ENST00000624309 274 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
BHLHA9Q7RTU4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.77□□□□□ -1.81
BHLHA9Q7RTU4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms