Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC234772.3-201ENST00000602277 528 ntBASIC3.06□□□□□ -1.92
C11orf88Q6PI97 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.06□□□□□ -1.92
C11orf88Q6PI97 AL732618.1-201ENST00000623251 301 ntBASIC3.06□□□□□ -1.92
C11orf88Q6PI97 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
C11orf88Q6PI97 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
C11orf88Q6PI97 AC006378.2-201ENST00000623178 2476 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RNA5SP383-201ENST00000362934 120 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RSL24D1P4-201ENST00000400938 484 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RNU2-49P-201ENST00000410666 184 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 USP9YP13-201ENST00000417797 480 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 USP9YP26-201ENST00000421008 661 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 LARP1BP3-201ENST00000437229 869 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC005094.1-201ENST00000440420 368 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC104978.1-201ENST00000449387 391 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC108059.3-201ENST00000456388 214 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 SNORD105B-201ENST00000458770 79 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AL133162.1-201ENST00000463228 453 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RPL36AP51-201ENST00000487216 318 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RN7SKP18-201ENST00000516005 275 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 RNU6-352P-201ENST00000516908 107 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC022695.1-201ENST00000522089 237 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC007536.1-201ENST00000533382 349 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC025281.1-201ENST00000567026 265 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC087499.8-201ENST00000578406 226 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC103810.1-201ENST00000579873 453 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 MIR4307-201ENST00000582802 84 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AP000811.1-201ENST00000603803 651 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 SNORA62.6-201ENST00000606322 83 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC239868.4-201ENST00000608318 671 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AL355472.4-201ENST00000610233 626 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AC012442.3-202ENST00000636742 206 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AP000553.6-201ENST00000641242 118 ntBASIC3.05□□□□□ -1.92
C11orf88Q6PI97 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.05□□□□□ -1.92
C11orf88Q6PI97 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RNA5SP119-201ENST00000362715 117 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RNU5A-8P-201ENST00000364102 114 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 MIR23A-201ENST00000385245 73 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RNA5SP492-201ENST00000411330 114 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RPL19P1-201ENST00000411635 428 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RPL7P8-201ENST00000411964 730 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RAB9AP3-201ENST00000412737 573 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AC093578.1-201ENST00000415219 368 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AC098592.1-201ENST00000419352 333 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 HMGB1P27-201ENST00000431429 603 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 Z74696.2-201ENST00000436514 498 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 SNRPEP9-201ENST00000436794 238 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 YWHAZP7-201ENST00000436906 631 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RPL22P17-201ENST00000438729 315 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 AL357552.1-201ENST00000445254 415 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RAB9AP1-201ENST00000449393 573 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RPL23AP41-201ENST00000484754 458 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 RPS15AP34-201ENST00000487776 387 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.04□□□□□ -1.92
C11orf88Q6PI97 SEM1P1-201ENST00000506694 209 ntBASIC3.04□□□□□ -1.92
C11orf88Q6PI97 SNORA3.4-201ENST00000515969 96 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms