Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
RNF43Q68DV7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.09□□□□□ -1.6
RNF43Q68DV7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.09□□□□□ -1.6
RNF43Q68DV7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RNF43Q68DV7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RNF43Q68DV7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 PABPC1P7-201ENST00000413177 1513 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 RBPJP2-201ENST00000618187 1444 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 ZNF33CP-201ENST00000432492 2030 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 Y_RNA.29-201ENST00000362570 113 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 RNU6-338P-201ENST00000383888 105 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 RNU6-886P-201ENST00000384319 105 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 SNORD70.1-201ENST00000391007 85 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AL132765.1-201ENST00000434165 553 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC016696.1-201ENST00000446949 318 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 RNU7-59P-201ENST00000459101 61 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC022795.1-201ENST00000473808 480 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 SNORA25.11-201ENST00000515935 105 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 RNU6-570P-201ENST00000517051 105 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC091516.1-201ENST00000549191 703 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 SUB1P3-201ENST00000564581 315 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC084783.1-201ENST00000565846 910 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 CYCSP40-201ENST00000575927 294 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 HMGB2P1-201ENST00000591146 634 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC009779.6-201ENST00000603972 165 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 RAC1P9-201ENST00000604990 392 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AL161423.1-201ENST00000613700 262 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC132825.6-201ENST00000638861 357 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AL596275.2-204ENST00000641628 552 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 AL596275.2-206ENST00000641957 626 ntBASIC5.08□□□□□ -1.6
RNF43Q68DV7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF43Q68DV7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF43Q68DV7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC009313.2-201ENST00000417893 1941 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 Y_RNA.19-201ENST00000362462 99 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 SNORD27-201ENST00000363981 72 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 RNA5SP479-201ENST00000364858 117 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 RNU6-662P-201ENST00000384253 104 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 Y_RNA.518-201ENST00000384552 113 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AP000275.1-201ENST00000411943 390 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 RPLP0P7-201ENST00000416050 667 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 CKS1BP6-201ENST00000424932 240 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC000111.2-201ENST00000448200 210 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AL691482.1-201ENST00000453255 87 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AURKAPS2-201ENST00000454983 333 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC091180.1-201ENST00000462104 372 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC117503.1-201ENST00000472241 394 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 RBBP4P6-201ENST00000508098 202 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC108078.2-201ENST00000510750 236 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 RNU6-323P-201ENST00000521915 107 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC130289.1-201ENST00000577321 73 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC104763.2-201ENST00000604179 382 ntBASIC5.07□□□□□ -1.6
RNF43Q68DV7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF43Q68DV7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF43Q68DV7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms