Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC022884.2-201ENST00000578535 580 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC011944.2-201ENST00000624440 683 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 AC011978.2-201ENST00000569835 2054 ntBASIC6.14□□□□□ -1.43
RC3H1Q5TC82 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RC3H1Q5TC82 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 snoU2_19.2-201ENST00000363024 80 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 U3.32-201ENST00000408116 212 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 EIF4EP2-201ENST00000422816 654 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 RPL7AP61-201ENST00000443410 636 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AP000942.1-201ENST00000463969 747 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC091153.1-201ENST00000466297 402 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC011276.1-201ENST00000469688 323 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC091868.1-201ENST00000508746 304 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC027369.5-201ENST00000533838 755 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC105129.1-201ENST00000560250 297 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC073657.2-201ENST00000605661 303 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC125257.1-201ENST00000560400 2930 ntBASIC6.13□□□□□ -1.43
RC3H1Q5TC82 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RC3H1Q5TC82 AC109446.4-201ENST00000623235 2755 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 ABCC13-202ENST00000463099 3842 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNA5SP388-201ENST00000362584 119 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 SNORA73.1-201ENST00000363107 205 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNU6-946P-201ENST00000383878 107 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RPS4XP7-201ENST00000406274 780 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNU6-735P-201ENST00000410612 107 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AL445305.1-201ENST00000432577 575 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 OR4C10P-201ENST00000434991 931 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AL359893.1-201ENST00000447628 1580 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RPS23P5-201ENST00000495419 428 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNU7-200P-201ENST00000516105 62 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNU6-911P-201ENST00000516523 104 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RNU6-861P-201ENST00000516745 106 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AC024405.2-202ENST00000532731 184 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 RPL21P7-201ENST00000557463 483 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RC3H1Q5TC82 ZFRP1-201ENST00000457579 2970 ntBASIC6.12□□□□□ -1.43
RC3H1Q5TC82 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC138393.1-203ENST00000327086 343 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RN7SKP145-201ENST00000363291 303 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RNA5SP509-201ENST00000364577 119 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 SNORA70.6-201ENST00000383934 134 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RNA5SP111-201ENST00000411386 101 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AL353691.1-201ENST00000451332 387 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RPS27AP1-201ENST00000475545 471 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 RN7SL432P-201ENST00000484057 298 ntBASIC6.11□□□□□ -1.43
RC3H1Q5TC82 AC018437.1-201ENST00000492214 406 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms