Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC087516.1-201ENST00000561236 2428 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL078621.3-201ENST00000623707 2042 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC007685.1-201ENST00000329806 452 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.121-201ENST00000363309 113 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 SNORA58B-201ENST00000364259 136 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.412-201ENST00000384001 104 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 MIR105-2-201ENST00000385083 81 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RNU1-77P-201ENST00000390868 162 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RNA5SP91-201ENST00000390902 119 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RN7SKP114-201ENST00000410327 279 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL096701.2-201ENST00000416920 238 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 MRPS21P2-201ENST00000424704 264 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RPL21P40-201ENST00000428586 483 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 GAPDHP58-201ENST00000438477 1006 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 FHP1-201ENST00000442741 703 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL357134.1-201ENST00000445848 426 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RN7SL51P-201ENST00000468230 285 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 OR2AO1P-201ENST00000476497 403 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RPL21P6-201ENST00000479171 504 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 HMGN1P11-201ENST00000508668 303 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-27P-201ENST00000516146 107 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 SNRPGP16-201ENST00000533275 226 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC055872.1-201ENST00000570978 278 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC006115.2-201ENST00000596823 202 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC211433.2-201ENST00000608433 387 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AC025574.2-201ENST00000615621 514 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RMST_4.1-201ENST00000616886 107 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 AL121839.2-201ENST00000565058 6943 ntBASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNFT1Q5M7Z0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-989P-201ENST00000362756 107 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-288P-201ENST00000363690 104 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU4-56P-201ENST00000364700 142 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 SNORA40.19-201ENST00000390846 128 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 USP9YP7-201ENST00000436723 430 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 USP9YP32-201ENST00000452432 430 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RPL10P17-201ENST00000453852 316 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AC034236.1-201ENST00000469891 373 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU6-390P-201ENST00000516259 103 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU7-121P-201ENST00000516604 62 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RNU7-110P-201ENST00000516891 62 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 Y_RNA.709-201ENST00000516952 92 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 RPL21P9-201ENST00000556149 474 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AC000068.2-201ENST00000608816 460 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 TUG1_4.1-201ENST00000619464 181 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 MIR6837-201ENST00000620884 64 ntBASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNFT1Q5M7Z0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms